Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE4Q96A23 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE4Q96A23 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE4Q96A23 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE4Q96A23 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE4Q96A23 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE4Q96A23 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CPNE4Q96A23 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 SDHAP1-207ENST00000440850 2000 ntBASIC17.18■□□□□ 0.34
CPNE4Q96A23 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 TSPY21P-201ENST00000433481 731 ntBASIC17.18■□□□□ 0.34
CPNE4Q96A23 BX088651.1-201ENST00000540551 451 ntBASIC17.18■□□□□ 0.34
CPNE4Q96A23 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE4Q96A23 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE4Q96A23 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.17■□□□□ 0.34
CPNE4Q96A23 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE4Q96A23 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
CPNE4Q96A23 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 AC097488.1-201ENST00000507834 756 ntBASIC17.17■□□□□ 0.34
CPNE4Q96A23 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 PRSS44-201ENST00000515154 1146 ntBASIC17.17■□□□□ 0.34
CPNE4Q96A23 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE4Q96A23 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.17■□□□□ 0.34
CPNE4Q96A23 AP000525.1-201ENST00000608286 694 ntBASIC17.17■□□□□ 0.34
CPNE4Q96A23 Z82202.1-201ENST00000623446 1880 ntBASIC17.17■□□□□ 0.34
CPNE4Q96A23 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE4Q96A23 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CPNE4Q96A23 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE4Q96A23 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 AP005242.2-201ENST00000580065 1175 ntBASIC17.16■□□□□ 0.34
CPNE4Q96A23 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 AC073912.3-201ENST00000624414 853 ntBASIC17.16■□□□□ 0.34
CPNE4Q96A23 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 AC079598.2-202ENST00000546624 1451 ntBASIC17.16■□□□□ 0.34
CPNE4Q96A23 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms