Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.61■■□□□ 1.37
RPGRQ92834 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
RPGRQ92834 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RPGRQ92834 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RPGRQ92834 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RPGRQ92834 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RPGRQ92834 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RPGRQ92834 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RPGRQ92834 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RPGRQ92834 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.61■■□□□ 1.37
RPGRQ92834 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.6■■□□□ 1.37
RPGRQ92834 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RPGRQ92834 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RPGRQ92834 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
RPGRQ92834 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RPGRQ92834 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.6■■□□□ 1.37
RPGRQ92834 ZNF815P-204ENST00000434898 1737 ntBASIC23.6■■□□□ 1.37
RPGRQ92834 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
RPGRQ92834 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.6■■□□□ 1.37
RPGRQ92834 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.6■■□□□ 1.37
RPGRQ92834 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
RPGRQ92834 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
RPGRQ92834 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.6■■□□□ 1.37
RPGRQ92834 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.6■■□□□ 1.37
RPGRQ92834 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.6■■□□□ 1.37
RPGRQ92834 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.6■■□□□ 1.37
RPGRQ92834 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RPGRQ92834 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.6■■□□□ 1.37
RPGRQ92834 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.59■■□□□ 1.37
RPGRQ92834 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 TSPY21P-201ENST00000433481 731 ntBASIC23.59■■□□□ 1.37
RPGRQ92834 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.59■■□□□ 1.37
RPGRQ92834 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
RPGRQ92834 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.59■■□□□ 1.37
RPGRQ92834 AC024243.1-201ENST00000609234 778 ntBASIC23.59■■□□□ 1.37
RPGRQ92834 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 GPAT2P1-201ENST00000444924 1672 ntBASIC23.59■■□□□ 1.37
RPGRQ92834 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RPGRQ92834 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.59■■□□□ 1.37
RPGRQ92834 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RPGRQ92834 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RPGRQ92834 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.58■■□□□ 1.37
RPGRQ92834 PRELID1P1-202ENST00000567272 903 ntBASIC23.58■■□□□ 1.37
RPGRQ92834 MIR3652-201ENST00000579335 131 ntBASIC23.58■■□□□ 1.37
RPGRQ92834 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.58■■□□□ 1.37
RPGRQ92834 AC092329.2-201ENST00000598402 547 ntBASIC23.58■■□□□ 1.37
RPGRQ92834 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RPGRQ92834 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RPGRQ92834 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RPGRQ92834 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RPGRQ92834 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.57■■□□□ 1.36
RPGRQ92834 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.57■■□□□ 1.36
RPGRQ92834 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RPGRQ92834 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.57■■□□□ 1.36
RPGRQ92834 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RPGRQ92834 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RPGRQ92834 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RPGRQ92834 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RPGRQ92834 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.57■■□□□ 1.36
RPGRQ92834 AC036111.1-201ENST00000533973 1582 ntBASIC23.57■■□□□ 1.36
RPGRQ92834 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
RPGRQ92834 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.56■■□□□ 1.36
RPGRQ92834 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.56■■□□□ 1.36
RPGRQ92834 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.56■■□□□ 1.36
RPGRQ92834 AC007375.3-201ENST00000600936 2314 ntBASIC23.56■■□□□ 1.36
RPGRQ92834 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
RPGRQ92834 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RPGRQ92834 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RPGRQ92834 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.55■■□□□ 1.36
RPGRQ92834 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms