Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM9SF4Q92544 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.07■□□□□ 0.48
TM9SF4Q92544 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 TFP1-202ENST00000475455 1573 ntBASIC18.06■□□□□ 0.48
TM9SF4Q92544 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 CYP2D8P-201ENST00000433633 1490 ntBASIC18.06■□□□□ 0.48
TM9SF4Q92544 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM9SF4Q92544 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.06■□□□□ 0.48
TM9SF4Q92544 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 KRT18P57-201ENST00000443599 1254 ntBASIC18.05■□□□□ 0.48
TM9SF4Q92544 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 KRT18P16-201ENST00000510337 1294 ntBASIC18.05■□□□□ 0.48
TM9SF4Q92544 EGLN1P1-201ENST00000531623 762 ntBASIC18.05■□□□□ 0.48
TM9SF4Q92544 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TM9SF4Q92544 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF4Q92544 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.04■□□□□ 0.48
TM9SF4Q92544 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.04■□□□□ 0.48
TM9SF4Q92544 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 AC018553.1-201ENST00000616682 1458 ntBASIC18.04■□□□□ 0.48
TM9SF4Q92544 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TM9SF4Q92544 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.04■□□□□ 0.48
TM9SF4Q92544 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.04■□□□□ 0.48
TM9SF4Q92544 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TM9SF4Q92544 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.04■□□□□ 0.48
TM9SF4Q92544 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.04■□□□□ 0.48
TM9SF4Q92544 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF4Q92544 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 AL691432.2-201ENST00000607222 2038 ntBASIC18.03■□□□□ 0.48
TM9SF4Q92544 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 B3GAT3P1-201ENST00000471720 806 ntBASIC18.03■□□□□ 0.48
TM9SF4Q92544 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms