Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
DDX1Q92499 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DDX1Q92499 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.42■□□□□ 0.86
DDX1Q92499 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
DDX1Q92499 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX1Q92499 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.42■□□□□ 0.86
DDX1Q92499 Z85996.1-201ENST00000494644 937 ntBASIC20.42■□□□□ 0.86
DDX1Q92499 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX1Q92499 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.42■□□□□ 0.86
DDX1Q92499 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX1Q92499 FEM1AP3-201ENST00000403722 1741 ntBASIC20.41■□□□□ 0.86
DDX1Q92499 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 CROCCP3-202ENST00000420820 1947 ntBASIC20.41■□□□□ 0.86
DDX1Q92499 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.41■□□□□ 0.86
DDX1Q92499 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.41■□□□□ 0.86
DDX1Q92499 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.41■□□□□ 0.86
DDX1Q92499 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DDX1Q92499 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.41■□□□□ 0.86
DDX1Q92499 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.41■□□□□ 0.86
DDX1Q92499 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DDX1Q92499 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.41■□□□□ 0.86
DDX1Q92499 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.41■□□□□ 0.86
DDX1Q92499 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.41■□□□□ 0.86
DDX1Q92499 AL445675.2-201ENST00000620291 557 ntBASIC20.41■□□□□ 0.86
DDX1Q92499 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DDX1Q92499 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
DDX1Q92499 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.41■□□□□ 0.86
DDX1Q92499 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX1Q92499 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
DDX1Q92499 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
DDX1Q92499 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
DDX1Q92499 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.4■□□□□ 0.86
DDX1Q92499 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
DDX1Q92499 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX1Q92499 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX1Q92499 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX1Q92499 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DDX1Q92499 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX1Q92499 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
DDX1Q92499 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX1Q92499 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DDX1Q92499 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
DDX1Q92499 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX1Q92499 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.39■□□□□ 0.85
DDX1Q92499 NIFKP9-201ENST00000419265 221 ntBASIC20.39■□□□□ 0.85
DDX1Q92499 TSPY23P-201ENST00000440136 739 ntBASIC20.39■□□□□ 0.85
DDX1Q92499 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX1Q92499 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.39■□□□□ 0.85
DDX1Q92499 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX1Q92499 AL353708.3-201ENST00000610272 989 ntBASIC20.39■□□□□ 0.85
DDX1Q92499 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DDX1Q92499 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX1Q92499 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
DDX1Q92499 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX1Q92499 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
DDX1Q92499 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX1Q92499 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX1Q92499 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.39■□□□□ 0.85
DDX1Q92499 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms