Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
TRPM4Q8TD43 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TRPM4Q8TD43 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.71■■□□□ 1.23
TRPM4Q8TD43 AL136038.4-201ENST00000603606 1261 ntBASIC22.71■■□□□ 1.23
TRPM4Q8TD43 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
TRPM4Q8TD43 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.71■■□□□ 1.23
TRPM4Q8TD43 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRPM4Q8TD43 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRPM4Q8TD43 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRPM4Q8TD43 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRPM4Q8TD43 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.7■■□□□ 1.23
TRPM4Q8TD43 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 MRPL3P1-201ENST00000400109 1033 ntBASIC22.7■■□□□ 1.22
TRPM4Q8TD43 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 AC009237.14-201ENST00000609975 1594 ntBASIC22.7■■□□□ 1.22
TRPM4Q8TD43 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 AP005212.1-201ENST00000581547 1997 ntBASIC22.7■■□□□ 1.22
TRPM4Q8TD43 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.7■■□□□ 1.22
TRPM4Q8TD43 AC133561.1-201ENST00000568600 2415 ntBASIC22.7■■□□□ 1.22
TRPM4Q8TD43 AL391807.1-203ENST00000604392 2365 ntBASIC22.69■■□□□ 1.22
TRPM4Q8TD43 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 AC104417.2-201ENST00000562989 1793 ntBASIC22.69■■□□□ 1.22
TRPM4Q8TD43 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TRPM4Q8TD43 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.68■■□□□ 1.22
TRPM4Q8TD43 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRPM4Q8TD43 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 AC012615.1-201ENST00000565797 1299 ntBASIC22.67■■□□□ 1.22
TRPM4Q8TD43 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
TRPM4Q8TD43 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRPM4Q8TD43 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRPM4Q8TD43 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
TRPM4Q8TD43 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRPM4Q8TD43 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.66■■□□□ 1.22
TRPM4Q8TD43 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TRPM4Q8TD43 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms