Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNIH3Q8TBE1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 AC116351.2-201ENST00000606540 1585 ntBASIC17.49■□□□□ 0.39
CNIH3Q8TBE1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 MIR638-201ENST00000385237 100 ntBASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 YBX1P1-201ENST00000445822 960 ntBASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 AC023632.3-201ENST00000521633 145 ntBASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 AL162412.1-201ENST00000567129 965 ntBASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CNIH3Q8TBE1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 AC010536.3-201ENST00000620306 533 ntBASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
CNIH3Q8TBE1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms