Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC10.52□□□□□ -0.72
SPTSSBQ8NFR3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
SPTSSBQ8NFR3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
SPTSSBQ8NFR3 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 OR7E47P-201ENST00000546390 1422 ntBASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 DUX4L4-201ENST00000566884 1269 ntBASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 AC125437.2-201ENST00000625180 2167 ntBASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SPTSSBQ8NFR3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 AC022616.5-201ENST00000518796 181 ntBASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 CROCCP2-202ENST00000412962 2773 ntBASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SPTSSBQ8NFR3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 C8orf49-201ENST00000525043 1968 ntBASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms