Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 AC233263.1-201ENST00000578059 224 ntBASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 HLA-A-209ENST00000638375 975 ntBASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 IRX1P1-201ENST00000438849 1838 ntBASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 AC005332.8-201ENST00000622750 2735 ntBASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM1Q8N8F7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 FEM1AP3-201ENST00000403722 1741 ntBASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 AC106820.2-201ENST00000563775 3264 ntBASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 ESRRAP1-201ENST00000400596 1257 ntBASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 AL160286.2-201ENST00000567150 934 ntBASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM1Q8N8F7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSMEM1Q8N8F7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LSMEM1Q8N8F7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
LSMEM1Q8N8F7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
LSMEM1Q8N8F7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSMEM1Q8N8F7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
LSMEM1Q8N8F7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.52■□□□□ 0.39
LSMEM1Q8N8F7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
LSMEM1Q8N8F7 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 AC006333.2-201ENST00000607957 2099 ntBASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 KRT16P5-201ENST00000455284 522 ntBASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 AC133681.1-201ENST00000465482 601 ntBASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 CROCCP3-202ENST00000420820 1947 ntBASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSMEM1Q8N8F7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms