Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC33Q8N5R6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC33Q8N5R6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC33Q8N5R6 AC092865.7-201ENST00000641832 219 ntBASIC20.08■□□□□ 0.81
CCDC33Q8N5R6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 AC005332.7-201ENST00000614046 2005 ntBASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC33Q8N5R6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 KRT18P57-201ENST00000443599 1254 ntBASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 NAPSB-206ENST00000562112 1266 ntBASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
CCDC33Q8N5R6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC33Q8N5R6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 FITM1-202ENST00000559294 800 ntBASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 AC010947.1-201ENST00000623454 693 ntBASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 AL020996.1-203ENST00000536896 2307 ntBASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC33Q8N5R6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 AL032819.2-201ENST00000624543 2162 ntBASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 LINC01465-201ENST00000408887 1940 ntBASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms