Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 CLEC4GP1-201ENST00000596555 870 ntBASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPOQ8N3V7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 AC083849.1-201ENST00000615227 514 ntBASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 HYMAI.1-201ENST00000620949 238 ntBASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPOQ8N3V7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 LINC01465-201ENST00000408887 1940 ntBASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 AC020907.5-201ENST00000624372 1936 ntBASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 ATP5G2P1-201ENST00000433580 426 ntBASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPOQ8N3V7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 KRT8P11-201ENST00000409686 1436 ntBASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 LINC01311-201ENST00000565162 1445 ntBASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 GCSHP2-201ENST00000560971 527 ntBASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms