Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIX5Q8N196 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.59■□□□□ 0.73
SIX5Q8N196 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIX5Q8N196 SMG8-203ENST00000578922 2178 ntBASIC19.59■□□□□ 0.73
SIX5Q8N196 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIX5Q8N196 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIX5Q8N196 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SIX5Q8N196 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SIX5Q8N196 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.59■□□□□ 0.73
SIX5Q8N196 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIX5Q8N196 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.59■□□□□ 0.73
SIX5Q8N196 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SIX5Q8N196 MIR3180-1-201ENST00000580374 94 ntBASIC19.59■□□□□ 0.73
SIX5Q8N196 MIR3180-3-201ENST00000584616 94 ntBASIC19.59■□□□□ 0.73
SIX5Q8N196 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SIX5Q8N196 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIX5Q8N196 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIX5Q8N196 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SIX5Q8N196 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIX5Q8N196 AC006128.1-201ENST00000624704 1661 ntBASIC19.59■□□□□ 0.73
SIX5Q8N196 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX5Q8N196 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX5Q8N196 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX5Q8N196 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX5Q8N196 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.58■□□□□ 0.73
SIX5Q8N196 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.58■□□□□ 0.73
SIX5Q8N196 AC016734.2-201ENST00000624325 1377 ntBASIC19.58■□□□□ 0.73
SIX5Q8N196 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX5Q8N196 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX5Q8N196 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.58■□□□□ 0.73
SIX5Q8N196 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX5Q8N196 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX5Q8N196 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SIX5Q8N196 AL022342.1-201ENST00000400363 863 ntBASIC19.58■□□□□ 0.72
SIX5Q8N196 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIX5Q8N196 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.58■□□□□ 0.72
SIX5Q8N196 RASA4DP-201ENST00000460726 1199 ntBASIC19.58■□□□□ 0.72
SIX5Q8N196 AC009078.2-202ENST00000463353 338 ntBASIC19.58■□□□□ 0.72
SIX5Q8N196 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.58■□□□□ 0.72
SIX5Q8N196 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIX5Q8N196 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.58■□□□□ 0.72
SIX5Q8N196 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIX5Q8N196 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.58■□□□□ 0.72
SIX5Q8N196 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SIX5Q8N196 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
SIX5Q8N196 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX5Q8N196 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIX5Q8N196 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.58■□□□□ 0.72
SIX5Q8N196 KRT8P11-201ENST00000409686 1436 ntBASIC19.58■□□□□ 0.72
SIX5Q8N196 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SIX5Q8N196 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX5Q8N196 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.57■□□□□ 0.72
SIX5Q8N196 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SIX5Q8N196 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.57■□□□□ 0.72
SIX5Q8N196 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.57■□□□□ 0.72
SIX5Q8N196 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.57■□□□□ 0.72
SIX5Q8N196 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SIX5Q8N196 AC034232.1-201ENST00000506026 1064 ntBASIC19.57■□□□□ 0.72
SIX5Q8N196 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.57■□□□□ 0.72
SIX5Q8N196 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.57■□□□□ 0.72
SIX5Q8N196 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.57■□□□□ 0.72
SIX5Q8N196 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.57■□□□□ 0.72
SIX5Q8N196 IFNL4P1-201ENST00000607083 540 ntBASIC19.57■□□□□ 0.72
SIX5Q8N196 AC004263.2-201ENST00000617183 678 ntBASIC19.57■□□□□ 0.72
SIX5Q8N196 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.57■□□□□ 0.72
SIX5Q8N196 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SIX5Q8N196 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.57■□□□□ 0.72
SIX5Q8N196 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SIX5Q8N196 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SIX5Q8N196 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.56■□□□□ 0.72
SIX5Q8N196 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SIX5Q8N196 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.56■□□□□ 0.72
SIX5Q8N196 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SIX5Q8N196 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.56■□□□□ 0.72
SIX5Q8N196 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.56■□□□□ 0.72
SIX5Q8N196 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.56■□□□□ 0.72
SIX5Q8N196 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.56■□□□□ 0.72
SIX5Q8N196 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SIX5Q8N196 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SIX5Q8N196 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.56■□□□□ 0.72
SIX5Q8N196 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.56■□□□□ 0.72
SIX5Q8N196 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms