Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.95■□□□□ 0.62
APLFQ8IW19 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.95■□□□□ 0.62
APLFQ8IW19 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APLFQ8IW19 KRT17P2-201ENST00000300992 1314 ntBASIC18.95■□□□□ 0.62
APLFQ8IW19 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.95■□□□□ 0.62
APLFQ8IW19 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
APLFQ8IW19 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.95■□□□□ 0.62
APLFQ8IW19 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
APLFQ8IW19 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
APLFQ8IW19 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.95■□□□□ 0.62
APLFQ8IW19 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.94■□□□□ 0.62
APLFQ8IW19 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.94■□□□□ 0.62
APLFQ8IW19 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
APLFQ8IW19 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.94■□□□□ 0.62
APLFQ8IW19 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
APLFQ8IW19 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
APLFQ8IW19 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
APLFQ8IW19 AC211429.1-201ENST00000415277 523 ntBASIC18.94■□□□□ 0.62
APLFQ8IW19 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.94■□□□□ 0.62
APLFQ8IW19 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.94■□□□□ 0.62
APLFQ8IW19 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.94■□□□□ 0.62
APLFQ8IW19 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
APLFQ8IW19 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.94■□□□□ 0.62
APLFQ8IW19 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.94■□□□□ 0.62
APLFQ8IW19 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.94■□□□□ 0.62
APLFQ8IW19 AC005829.2-201ENST00000571422 1056 ntBASIC18.94■□□□□ 0.62
APLFQ8IW19 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.94■□□□□ 0.62
APLFQ8IW19 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
APLFQ8IW19 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.94■□□□□ 0.62
APLFQ8IW19 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
APLFQ8IW19 LINC01023-201ENST00000606054 436 ntBASIC18.94■□□□□ 0.62
APLFQ8IW19 AC124016.1-201ENST00000609552 612 ntBASIC18.94■□□□□ 0.62
APLFQ8IW19 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.94■□□□□ 0.62
APLFQ8IW19 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APLFQ8IW19 AC138932.1-201ENST00000534164 6830 ntBASIC18.93■□□□□ 0.62
APLFQ8IW19 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.93■□□□□ 0.62
APLFQ8IW19 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 AL135905.2-201ENST00000584934 1404 ntBASIC18.93■□□□□ 0.62
APLFQ8IW19 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
APLFQ8IW19 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.93■□□□□ 0.62
APLFQ8IW19 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.93■□□□□ 0.62
APLFQ8IW19 FAM210CP-201ENST00000445714 574 ntBASIC18.93■□□□□ 0.62
APLFQ8IW19 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.93■□□□□ 0.62
APLFQ8IW19 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.93■□□□□ 0.62
APLFQ8IW19 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
APLFQ8IW19 LINC01465-201ENST00000408887 1940 ntBASIC18.93■□□□□ 0.62
APLFQ8IW19 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
APLFQ8IW19 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APLFQ8IW19 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.92■□□□□ 0.62
APLFQ8IW19 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
APLFQ8IW19 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
APLFQ8IW19 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.92■□□□□ 0.62
APLFQ8IW19 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.92■□□□□ 0.62
APLFQ8IW19 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.92■□□□□ 0.62
APLFQ8IW19 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.92■□□□□ 0.62
APLFQ8IW19 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
APLFQ8IW19 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.92■□□□□ 0.62
APLFQ8IW19 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.92■□□□□ 0.62
APLFQ8IW19 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
APLFQ8IW19 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.92■□□□□ 0.62
APLFQ8IW19 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.92■□□□□ 0.62
APLFQ8IW19 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.92■□□□□ 0.62
APLFQ8IW19 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 AC141586.5-201ENST00000624546 2050 ntBASIC18.92■□□□□ 0.62
APLFQ8IW19 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.92■□□□□ 0.62
APLFQ8IW19 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
APLFQ8IW19 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
APLFQ8IW19 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APLFQ8IW19 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms