Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 HLA-B-256ENST00000639848 1089 ntBASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 CROCCP1-201ENST00000426910 5675 ntBASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.32□□□□□ -0.44
MRPL55Q7Z7F7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 YBX1P10-201ENST00000444752 975 ntBASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 AC060766.5-201ENST00000590539 871 ntBASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 AC124283.5-201ENST00000624661 1809 ntBASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 AC026471.1-201ENST00000564629 3026 ntBASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 ZNF815P-204ENST00000434898 1737 ntBASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
MRPL55Q7Z7F7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL55Q7Z7F7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms