Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00336Q6ZUF6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC00336Q6ZUF6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 AC121338.2-201ENST00000622535 1744 ntBASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 FDX1P1-201ENST00000449115 551 ntBASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 KRT18P38-201ENST00000449496 1282 ntBASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 KRT17P6-201ENST00000453795 1220 ntBASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 CR769767.2-201ENST00000622735 460 ntBASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 AC012313.10-201ENST00000623509 926 ntBASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00336Q6ZUF6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 AC246785.2-201ENST00000432512 513 ntBASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 AP003041.3-201ENST00000527151 707 ntBASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 CKBP1-201ENST00000565489 1086 ntBASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 AC092329.2-201ENST00000598402 547 ntBASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 AC083849.1-201ENST00000615227 514 ntBASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00336Q6ZUF6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00336Q6ZUF6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00336Q6ZUF6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
LINC00336Q6ZUF6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
LINC00336Q6ZUF6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00336Q6ZUF6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
LINC00336Q6ZUF6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
LINC00336Q6ZUF6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 Z85996.1-201ENST00000494644 937 ntBASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms