Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 MST1L-201ENST00000442552 2185 ntBASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 AC060766.5-201ENST00000590539 871 ntBASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 AC083880.1-201ENST00000608266 535 ntBASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 HLA-B-256ENST00000639848 1089 ntBASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 PTBP1P-201ENST00000554374 1601 ntBASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 NOC2LP2-201ENST00000407594 1944 ntBASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM53Q6P2H8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 AC092368.3-202ENST00000574180 1591 ntBASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 AL162377.1-201ENST00000618844 1793 ntBASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM53Q6P2H8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms