Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 AC097381.1-201ENST00000429019 1296 ntBASIC18.06■□□□□ 0.48
LPCAT4Q643R3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 AC073592.3-201ENST00000625118 1834 ntBASIC18.06■□□□□ 0.48
LPCAT4Q643R3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LPCAT4Q643R3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 AC134043.2-201ENST00000624206 2238 ntBASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DUX4L2-201ENST00000561772 1275 ntBASIC18.05■□□□□ 0.48
LPCAT4Q643R3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DUX4L6-201ENST00000626483 1275 ntBASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DUX4L1-201ENST00000627662 1275 ntBASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DUX4L8-201ENST00000629013 1275 ntBASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DUX4L3-201ENST00000630187 1275 ntBASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DUX4L7-201ENST00000630678 1275 ntBASIC18.05■□□□□ 0.48
LPCAT4Q643R3 DUX4L5-201ENST00000630834 1275 ntBASIC18.05■□□□□ 0.48
LPCAT4Q643R3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.05■□□□□ 0.48
LPCAT4Q643R3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 ZNF815P-204ENST00000434898 1737 ntBASIC18.04■□□□□ 0.48
LPCAT4Q643R3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 AC027682.1-201ENST00000562846 899 ntBASIC18.04■□□□□ 0.48
LPCAT4Q643R3 AL136162.1-201ENST00000607711 1078 ntBASIC18.04■□□□□ 0.48
LPCAT4Q643R3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LPCAT4Q643R3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.03■□□□□ 0.48
LPCAT4Q643R3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms