Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF220Q5VTB9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 AC004911.1-201ENST00000416316 871 ntBASIC18.4■□□□□ 0.54
RNF220Q5VTB9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 AC133552.2-202ENST00000575694 574 ntBASIC18.4■□□□□ 0.54
RNF220Q5VTB9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.4■□□□□ 0.54
RNF220Q5VTB9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 KRT8P20-201ENST00000423953 1409 ntBASIC18.4■□□□□ 0.54
RNF220Q5VTB9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RNF220Q5VTB9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.39■□□□□ 0.53
RNF220Q5VTB9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 AC093787.1-201ENST00000450396 207 ntBASIC18.39■□□□□ 0.53
RNF220Q5VTB9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 AC080038.1-201ENST00000611274 1154 ntBASIC18.39■□□□□ 0.53
RNF220Q5VTB9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 AC073111.5-205ENST00000641717 521 ntBASIC18.39■□□□□ 0.53
RNF220Q5VTB9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF220Q5VTB9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
RNF220Q5VTB9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms