Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 AL359075.1-203ENST00000462729 1002 ntBASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 AC010203.1-204ENST00000548782 407 ntBASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARFGEF3Q5TH69 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 MYC-208ENST00000641036 567 ntBASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARFGEF3Q5TH69 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 AC092338.2-201ENST00000568827 1415 ntBASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 ATP5G1P1-201ENST00000448724 379 ntBASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 AP003041.3-201ENST00000527151 707 ntBASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 AL353719.1-201ENST00000566847 864 ntBASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 Z82202.1-201ENST00000623446 1880 ntBASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 TSPY23P-201ENST00000440136 739 ntBASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 CKBP1-201ENST00000565489 1086 ntBASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
ARFGEF3Q5TH69 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARFGEF3Q5TH69 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 SLC25A1P2-201ENST00000430693 912 ntBASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARFGEF3Q5TH69 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms