Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.29■□□□□ 0.84
VARS2Q5ST30 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.29■□□□□ 0.84
VARS2Q5ST30 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 PCDHAC2-203ENST00000615316 3011 ntBASIC20.29■□□□□ 0.84
VARS2Q5ST30 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.29■□□□□ 0.84
VARS2Q5ST30 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARS2Q5ST30 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VARS2Q5ST30 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARS2Q5ST30 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARS2Q5ST30 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VARS2Q5ST30 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 AL023973.1-201ENST00000624619 620 ntBASIC20.28■□□□□ 0.84
VARS2Q5ST30 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARS2Q5ST30 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VARS2Q5ST30 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARS2Q5ST30 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VARS2Q5ST30 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.27■□□□□ 0.84
VARS2Q5ST30 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.27■□□□□ 0.84
VARS2Q5ST30 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 TREX1-205ENST00000625293 1783 ntBASIC20.27■□□□□ 0.84
VARS2Q5ST30 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VARS2Q5ST30 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.27■□□□□ 0.84
VARS2Q5ST30 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.27■□□□□ 0.84
VARS2Q5ST30 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.27■□□□□ 0.84
VARS2Q5ST30 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.27■□□□□ 0.84
VARS2Q5ST30 AC092647.4-201ENST00000457211 535 ntBASIC20.27■□□□□ 0.84
VARS2Q5ST30 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.27■□□□□ 0.84
VARS2Q5ST30 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 MYC-208ENST00000641036 567 ntBASIC20.27■□□□□ 0.84
VARS2Q5ST30 AL031432.5-201ENST00000641059 760 ntBASIC20.27■□□□□ 0.84
VARS2Q5ST30 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARS2Q5ST30 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VARS2Q5ST30 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
VARS2Q5ST30 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VARS2Q5ST30 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VARS2Q5ST30 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.26■□□□□ 0.83
VARS2Q5ST30 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 MIR4674-201ENST00000582457 87 ntBASIC20.26■□□□□ 0.83
VARS2Q5ST30 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 AC140113.3-201ENST00000605663 199 ntBASIC20.26■□□□□ 0.83
VARS2Q5ST30 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARS2Q5ST30 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.26■□□□□ 0.83
VARS2Q5ST30 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms