Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.7■□□□□ 0.74
ALFQ53S48 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.7■□□□□ 0.74
ALFQ53S48 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 MMP23A-201ENST00000234610 1017 ntBASIC19.7■□□□□ 0.74
ALFQ53S48 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
ALFQ53S48 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 AC087499.1-201ENST00000418141 1075 ntBASIC19.7■□□□□ 0.74
ALFQ53S48 CRYGFP-201ENST00000418459 633 ntBASIC19.7■□□□□ 0.74
ALFQ53S48 TSPY23P-201ENST00000440136 739 ntBASIC19.7■□□□□ 0.74
ALFQ53S48 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ALFQ53S48 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.7■□□□□ 0.74
ALFQ53S48 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.7■□□□□ 0.74
ALFQ53S48 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
ALFQ53S48 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.7■□□□□ 0.74
ALFQ53S48 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.7■□□□□ 0.74
ALFQ53S48 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.7■□□□□ 0.74
ALFQ53S48 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.7■□□□□ 0.74
ALFQ53S48 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.7■□□□□ 0.74
ALFQ53S48 AC096733.2-201ENST00000609937 1394 ntBASIC19.7■□□□□ 0.74
ALFQ53S48 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.69■□□□□ 0.74
ALFQ53S48 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.69■□□□□ 0.74
ALFQ53S48 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
ALFQ53S48 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.69■□□□□ 0.74
ALFQ53S48 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.69■□□□□ 0.74
ALFQ53S48 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.69■□□□□ 0.74
ALFQ53S48 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.69■□□□□ 0.74
ALFQ53S48 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.69■□□□□ 0.74
ALFQ53S48 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.69■□□□□ 0.74
ALFQ53S48 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
ALFQ53S48 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.69■□□□□ 0.74
ALFQ53S48 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALFQ53S48 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ALFQ53S48 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.68■□□□□ 0.74
ALFQ53S48 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.68■□□□□ 0.74
ALFQ53S48 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.68■□□□□ 0.74
ALFQ53S48 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ALFQ53S48 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.68■□□□□ 0.74
ALFQ53S48 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ALFQ53S48 CYP2D8P-201ENST00000433633 1490 ntBASIC19.68■□□□□ 0.74
ALFQ53S48 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 MFAP1P1-201ENST00000442257 1255 ntBASIC19.68■□□□□ 0.74
ALFQ53S48 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.68■□□□□ 0.74
ALFQ53S48 AP005242.2-201ENST00000580065 1175 ntBASIC19.68■□□□□ 0.74
ALFQ53S48 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ALFQ53S48 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALFQ53S48 AC005332.7-201ENST00000614046 2005 ntBASIC19.68■□□□□ 0.74
ALFQ53S48 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ALFQ53S48 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.67■□□□□ 0.74
ALFQ53S48 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ALFQ53S48 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.67■□□□□ 0.74
ALFQ53S48 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 CKBP1-201ENST00000565489 1086 ntBASIC19.67■□□□□ 0.74
ALFQ53S48 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.67■□□□□ 0.74
ALFQ53S48 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.67■□□□□ 0.74
ALFQ53S48 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ALFQ53S48 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ALFQ53S48 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALFQ53S48 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.67■□□□□ 0.74
ALFQ53S48 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms