Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN12P56749 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN12P56749 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN12P56749 AC137761.2-201ENST00000561729 223 ntBASIC16.65■□□□□ 0.26
CLDN12P56749 AC145350.3-201ENST00000569033 163 ntBASIC16.65■□□□□ 0.26
CLDN12P56749 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN12P56749 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN12P56749 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CLDN12P56749 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN12P56749 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN12P56749 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 KRT17P1-201ENST00000399211 1546 ntBASIC16.65■□□□□ 0.26
CLDN12P56749 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN12P56749 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 AC068880.1-201ENST00000507289 2297 ntBASIC16.65■□□□□ 0.26
CLDN12P56749 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CLDN12P56749 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CLDN12P56749 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CLDN12P56749 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN12P56749 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
CLDN12P56749 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLDN12P56749 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLDN12P56749 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN12P56749 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 DUX4L16-201ENST00000555130 1264 ntBASIC16.64■□□□□ 0.25
CLDN12P56749 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN12P56749 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN12P56749 AC069236.1-201ENST00000604339 616 ntBASIC16.64■□□□□ 0.25
CLDN12P56749 AC011767.1-201ENST00000617410 1153 ntBASIC16.64■□□□□ 0.25
CLDN12P56749 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN12P56749 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CLDN12P56749 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN12P56749 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN12P56749 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN12P56749 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN12P56749 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN12P56749 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN12P56749 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN12P56749 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN12P56749 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN12P56749 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN12P56749 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN12P56749 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN12P56749 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN12P56749 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN12P56749 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN12P56749 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms