Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUMO3P55854 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.37■□□□□ 0.37
SUMO3P55854 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUMO3P55854 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUMO3P55854 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.37■□□□□ 0.37
SUMO3P55854 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUMO3P55854 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUMO3P55854 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUMO3P55854 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUMO3P55854 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.36■□□□□ 0.37
SUMO3P55854 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.36■□□□□ 0.37
SUMO3P55854 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
SUMO3P55854 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.36■□□□□ 0.37
SUMO3P55854 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.36■□□□□ 0.37
SUMO3P55854 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SUMO3P55854 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.36■□□□□ 0.37
SUMO3P55854 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.36■□□□□ 0.37
SUMO3P55854 AP003071.4-201ENST00000562276 1284 ntBASIC17.36■□□□□ 0.37
SUMO3P55854 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.36■□□□□ 0.37
SUMO3P55854 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.36■□□□□ 0.37
SUMO3P55854 REXO1L10P-201ENST00000615707 1290 ntBASIC17.36■□□□□ 0.37
SUMO3P55854 REXO1L12P-201ENST00000622156 912 ntBASIC17.36■□□□□ 0.37
SUMO3P55854 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 KRT17P2-201ENST00000300992 1314 ntBASIC17.36■□□□□ 0.37
SUMO3P55854 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.36■□□□□ 0.37
SUMO3P55854 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.36■□□□□ 0.37
SUMO3P55854 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SUMO3P55854 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.36■□□□□ 0.37
SUMO3P55854 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.36■□□□□ 0.37
SUMO3P55854 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.36■□□□□ 0.37
SUMO3P55854 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUMO3P55854 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.36■□□□□ 0.37
SUMO3P55854 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.36■□□□□ 0.37
SUMO3P55854 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SUMO3P55854 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
SUMO3P55854 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.35■□□□□ 0.37
SUMO3P55854 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.35■□□□□ 0.37
SUMO3P55854 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SUMO3P55854 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SUMO3P55854 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SUMO3P55854 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.35■□□□□ 0.37
SUMO3P55854 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SUMO3P55854 AC008040.2-201ENST00000461049 708 ntBASIC17.35■□□□□ 0.37
SUMO3P55854 AC096733.2-201ENST00000609937 1394 ntBASIC17.35■□□□□ 0.37
SUMO3P55854 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUMO3P55854 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SUMO3P55854 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.35■□□□□ 0.37
SUMO3P55854 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SUMO3P55854 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SUMO3P55854 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.34■□□□□ 0.37
SUMO3P55854 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SUMO3P55854 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.34■□□□□ 0.37
SUMO3P55854 SNORA78-201ENST00000459373 127 ntBASIC17.34■□□□□ 0.37
SUMO3P55854 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.34■□□□□ 0.37
SUMO3P55854 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.34■□□□□ 0.37
SUMO3P55854 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.34■□□□□ 0.37
SUMO3P55854 CKBP1-201ENST00000565489 1086 ntBASIC17.34■□□□□ 0.37
SUMO3P55854 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.34■□□□□ 0.37
SUMO3P55854 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
SUMO3P55854 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.34■□□□□ 0.37
SUMO3P55854 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.34■□□□□ 0.37
SUMO3P55854 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SUMO3P55854 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUMO3P55854 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUMO3P55854 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SUMO3P55854 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SUMO3P55854 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms