Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH12P55289 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH12P55289 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH12P55289 AC092368.3-202ENST00000574180 1591 ntBASIC17.85■□□□□ 0.45
CDH12P55289 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CDH12P55289 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH12P55289 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CDH12P55289 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CDH12P55289 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDH12P55289 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH12P55289 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
CDH12P55289 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH12P55289 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDH12P55289 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH12P55289 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH12P55289 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH12P55289 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH12P55289 AC026471.1-201ENST00000564629 3026 ntBASIC17.84■□□□□ 0.45
CDH12P55289 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH12P55289 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH12P55289 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH12P55289 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDH12P55289 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH12P55289 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDH12P55289 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH12P55289 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH12P55289 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH12P55289 AC098934.4-201ENST00000564127 592 ntBASIC17.84■□□□□ 0.45
CDH12P55289 AL138781.1-201ENST00000566567 1274 ntBASIC17.84■□□□□ 0.45
CDH12P55289 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH12P55289 HLA-B-256ENST00000639848 1089 ntBASIC17.84■□□□□ 0.45
CDH12P55289 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH12P55289 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH12P55289 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH12P55289 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH12P55289 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH12P55289 AC005082.1-201ENST00000413042 2259 ntBASIC17.83■□□□□ 0.45
CDH12P55289 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.83■□□□□ 0.45
CDH12P55289 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDH12P55289 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH12P55289 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH12P55289 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDH12P55289 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH12P55289 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH12P55289 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH12P55289 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 AC092666.2-201ENST00000613287 246 ntBASIC17.83■□□□□ 0.44
CDH12P55289 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH12P55289 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH12P55289 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH12P55289 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH12P55289 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH12P55289 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH12P55289 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH12P55289 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH12P55289 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH12P55289 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.82■□□□□ 0.44
CDH12P55289 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CDH12P55289 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH12P55289 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH12P55289 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH12P55289 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH12P55289 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH12P55289 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH12P55289 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH12P55289 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH12P55289 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH12P55289 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CDH12P55289 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH12P55289 WIZP1-201ENST00000531444 2299 ntBASIC17.81■□□□□ 0.44
CDH12P55289 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH12P55289 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH12P55289 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH12P55289 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDH12P55289 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms