Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 IRX1P1-201ENST00000438849 1838 ntBASIC19.92■□□□□ 0.78
CDH6P55285 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH6P55285 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDH6P55285 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDH6P55285 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.92■□□□□ 0.78
CDH6P55285 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH6P55285 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDH6P55285 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDH6P55285 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH6P55285 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH6P55285 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CDH6P55285 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH6P55285 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDH6P55285 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CDH6P55285 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH6P55285 ABHD17AP1-201ENST00000358206 933 ntBASIC19.91■□□□□ 0.78
CDH6P55285 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH6P55285 RPPH1-201ENST00000516869 333 ntBASIC19.91■□□□□ 0.78
CDH6P55285 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH6P55285 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.91■□□□□ 0.78
CDH6P55285 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDH6P55285 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH6P55285 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH6P55285 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH6P55285 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDH6P55285 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH6P55285 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH6P55285 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 FP475955.4-201ENST00000623131 1990 ntBASIC19.9■□□□□ 0.78
CDH6P55285 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH6P55285 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 AL020996.1-203ENST00000536896 2307 ntBASIC19.9■□□□□ 0.78
CDH6P55285 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDH6P55285 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH6P55285 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.9■□□□□ 0.78
CDH6P55285 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDH6P55285 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDH6P55285 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDH6P55285 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH6P55285 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH6P55285 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CDH6P55285 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH6P55285 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH6P55285 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDH6P55285 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH6P55285 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH6P55285 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH6P55285 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH6P55285 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.89■□□□□ 0.77
CDH6P55285 HTR7P1-201ENST00000538670 1336 ntBASIC19.89■□□□□ 0.77
CDH6P55285 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH6P55285 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH6P55285 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 AC093503.3-201ENST00000624917 2352 ntBASIC19.89■□□□□ 0.77
CDH6P55285 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH6P55285 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH6P55285 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH6P55285 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH6P55285 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms