Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1LP55160 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
NCKAP1LP55160 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1LP55160 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKAP1LP55160 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKAP1LP55160 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
NCKAP1LP55160 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKAP1LP55160 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1LP55160 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKAP1LP55160 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1LP55160 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1LP55160 MIR1238-201ENST00000408483 83 ntBASIC20.99■□□□□ 0.95
NCKAP1LP55160 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKAP1LP55160 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1LP55160 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1LP55160 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.99■□□□□ 0.95
NCKAP1LP55160 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
NCKAP1LP55160 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1LP55160 FEM1AP3-201ENST00000403722 1741 ntBASIC20.98■□□□□ 0.95
NCKAP1LP55160 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.98■□□□□ 0.95
NCKAP1LP55160 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.98■□□□□ 0.95
NCKAP1LP55160 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.98■□□□□ 0.95
NCKAP1LP55160 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 FP475955.4-201ENST00000623131 1990 ntBASIC20.98■□□□□ 0.95
NCKAP1LP55160 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.98■□□□□ 0.95
NCKAP1LP55160 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.98■□□□□ 0.95
NCKAP1LP55160 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.98■□□□□ 0.95
NCKAP1LP55160 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NCKAP1LP55160 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.98■□□□□ 0.95
NCKAP1LP55160 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1LP55160 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.98■□□□□ 0.95
NCKAP1LP55160 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKAP1LP55160 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 KRT8P9-201ENST00000558927 1449 ntBASIC20.97■□□□□ 0.95
NCKAP1LP55160 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 MMP23A-201ENST00000234610 1017 ntBASIC20.97■□□□□ 0.95
NCKAP1LP55160 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKAP1LP55160 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKAP1LP55160 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.97■□□□□ 0.95
NCKAP1LP55160 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.96■□□□□ 0.95
NCKAP1LP55160 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NCKAP1LP55160 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.96■□□□□ 0.95
NCKAP1LP55160 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.96■□□□□ 0.95
NCKAP1LP55160 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.96■□□□□ 0.95
NCKAP1LP55160 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.96■□□□□ 0.95
NCKAP1LP55160 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.96■□□□□ 0.95
NCKAP1LP55160 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
NCKAP1LP55160 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKAP1LP55160 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCKAP1LP55160 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKAP1LP55160 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKAP1LP55160 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCKAP1LP55160 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKAP1LP55160 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKAP1LP55160 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NCKAP1LP55160 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms