Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
EPHA4P54764 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.44■□□□□ 0.54
EPHA4P54764 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHA4P54764 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
EPHA4P54764 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 COX11P1-201ENST00000489116 835 ntBASIC18.44■□□□□ 0.54
EPHA4P54764 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.44■□□□□ 0.54
EPHA4P54764 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHA4P54764 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHA4P54764 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.44■□□□□ 0.54
EPHA4P54764 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.44■□□□□ 0.54
EPHA4P54764 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
EPHA4P54764 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHA4P54764 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
EPHA4P54764 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHA4P54764 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHA4P54764 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHA4P54764 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHA4P54764 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
EPHA4P54764 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
EPHA4P54764 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHA4P54764 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHA4P54764 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
EPHA4P54764 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHA4P54764 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA4P54764 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHA4P54764 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA4P54764 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA4P54764 AC117947.1-201ENST00000427448 529 ntBASIC18.43■□□□□ 0.54
EPHA4P54764 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
EPHA4P54764 TSPY23P-201ENST00000440136 739 ntBASIC18.43■□□□□ 0.54
EPHA4P54764 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.43■□□□□ 0.54
EPHA4P54764 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA4P54764 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
EPHA4P54764 AL031432.5-201ENST00000641059 760 ntBASIC18.43■□□□□ 0.54
EPHA4P54764 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA4P54764 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHA4P54764 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA4P54764 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA4P54764 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA4P54764 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
EPHA4P54764 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EPHA4P54764 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.42■□□□□ 0.54
EPHA4P54764 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.42■□□□□ 0.54
EPHA4P54764 RNF152P1-201ENST00000397754 604 ntBASIC18.42■□□□□ 0.54
EPHA4P54764 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.42■□□□□ 0.54
EPHA4P54764 AC063952.2-201ENST00000498792 1227 ntBASIC18.42■□□□□ 0.54
EPHA4P54764 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EPHA4P54764 AC022616.7-201ENST00000525383 220 ntBASIC18.42■□□□□ 0.54
EPHA4P54764 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.42■□□□□ 0.54
EPHA4P54764 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.42■□□□□ 0.54
EPHA4P54764 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
EPHA4P54764 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA4P54764 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA4P54764 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA4P54764 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.42■□□□□ 0.54
EPHA4P54764 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.41■□□□□ 0.54
EPHA4P54764 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.41■□□□□ 0.54
EPHA4P54764 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.41■□□□□ 0.54
EPHA4P54764 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
EPHA4P54764 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
EPHA4P54764 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
EPHA4P54764 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.41■□□□□ 0.54
EPHA4P54764 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.41■□□□□ 0.54
EPHA4P54764 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.41■□□□□ 0.54
EPHA4P54764 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.41■□□□□ 0.54
EPHA4P54764 NTF6B-201ENST00000591913 560 ntBASIC18.41■□□□□ 0.54
EPHA4P54764 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.41■□□□□ 0.54
EPHA4P54764 AC139887.4-201ENST00000607877 719 ntBASIC18.41■□□□□ 0.54
EPHA4P54764 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.41■□□□□ 0.54
EPHA4P54764 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.41■□□□□ 0.54
EPHA4P54764 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA4P54764 SDHAP1-207ENST00000440850 2000 ntBASIC18.4■□□□□ 0.54
EPHA4P54764 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms