Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.53■□□□□ 0.72
ATXN3P54252 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3P54252 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3P54252 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3P54252 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3P54252 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3P54252 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3P54252 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.53■□□□□ 0.72
ATXN3P54252 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3P54252 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ATXN3P54252 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3P54252 KRT8P20-201ENST00000423953 1409 ntBASIC19.52■□□□□ 0.72
ATXN3P54252 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATXN3P54252 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3P54252 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
ATXN3P54252 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATXN3P54252 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3P54252 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATXN3P54252 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.52■□□□□ 0.72
ATXN3P54252 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.52■□□□□ 0.72
ATXN3P54252 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.52■□□□□ 0.72
ATXN3P54252 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.52■□□□□ 0.72
ATXN3P54252 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.52■□□□□ 0.72
ATXN3P54252 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
ATXN3P54252 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.52■□□□□ 0.72
ATXN3P54252 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.52■□□□□ 0.72
ATXN3P54252 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATXN3P54252 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3P54252 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3P54252 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3P54252 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATXN3P54252 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATXN3P54252 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATXN3P54252 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATXN3P54252 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATXN3P54252 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATXN3P54252 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATXN3P54252 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATXN3P54252 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATXN3P54252 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.51■□□□□ 0.71
ATXN3P54252 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATXN3P54252 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
ATXN3P54252 EGLN1P1-201ENST00000531623 762 ntBASIC19.51■□□□□ 0.71
ATXN3P54252 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.51■□□□□ 0.71
ATXN3P54252 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATXN3P54252 AC125437.2-201ENST00000625180 2167 ntBASIC19.51■□□□□ 0.71
ATXN3P54252 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.51■□□□□ 0.71
ATXN3P54252 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATXN3P54252 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.5■□□□□ 0.71
ATXN3P54252 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.5■□□□□ 0.71
ATXN3P54252 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.5■□□□□ 0.71
ATXN3P54252 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.5■□□□□ 0.71
ATXN3P54252 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
ATXN3P54252 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.5■□□□□ 0.71
ATXN3P54252 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATXN3P54252 ECEL1P2-202ENST00000465689 757 ntBASIC19.5■□□□□ 0.71
ATXN3P54252 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.5■□□□□ 0.71
ATXN3P54252 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.5■□□□□ 0.71
ATXN3P54252 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.5■□□□□ 0.71
ATXN3P54252 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.5■□□□□ 0.71
ATXN3P54252 AP000974.1-201ENST00000623909 2387 ntBASIC19.5■□□□□ 0.71
ATXN3P54252 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
ATXN3P54252 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATXN3P54252 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.49■□□□□ 0.71
ATXN3P54252 AK4P3-201ENST00000418260 669 ntBASIC19.49■□□□□ 0.71
ATXN3P54252 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.49■□□□□ 0.71
ATXN3P54252 AC091076.1-201ENST00000610741 619 ntBASIC19.49■□□□□ 0.71
ATXN3P54252 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATXN3P54252 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.49■□□□□ 0.71
ATXN3P54252 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ATXN3P54252 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.49■□□□□ 0.71
ATXN3P54252 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.49■□□□□ 0.71
ATXN3P54252 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ATXN3P54252 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATXN3P54252 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
ATXN3P54252 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ATXN3P54252 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATXN3P54252 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.49■□□□□ 0.71
ATXN3P54252 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATXN3P54252 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATXN3P54252 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATXN3P54252 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATXN3P54252 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATXN3P54252 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms