Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SLC25A1P53007 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC25A1P53007 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SLC25A1P53007 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC25A1P53007 WIZP1-201ENST00000531444 2299 ntBASIC17.02■□□□□ 0.32
SLC25A1P53007 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SLC25A1P53007 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC25A1P53007 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC25A1P53007 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC25A1P53007 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SLC25A1P53007 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.02■□□□□ 0.32
SLC25A1P53007 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC25A1P53007 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC25A1P53007 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC25A1P53007 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC25A1P53007 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC25A1P53007 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC25A1P53007 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC25A1P53007 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC25A1P53007 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC25A1P53007 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC25A1P53007 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC25A1P53007 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SLC25A1P53007 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SLC25A1P53007 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SLC25A1P53007 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC25A1P53007 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC25A1P53007 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC25A1P53007 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC25A1P53007 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.01■□□□□ 0.31
SLC25A1P53007 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC25A1P53007 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC25A1P53007 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SLC25A1P53007 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC25A1P53007 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC25A1P53007 AL160286.2-201ENST00000567150 934 ntBASIC17.01■□□□□ 0.31
SLC25A1P53007 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC25A1P53007 AC090164.3-201ENST00000610780 2143 ntBASIC17.01■□□□□ 0.31
SLC25A1P53007 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC25A1P53007 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SLC25A1P53007 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC25A1P53007 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC25A1P53007 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SLC25A1P53007 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC25A1P53007 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17■□□□□ 0.31
SLC25A1P53007 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 C1QL1P1-201ENST00000568105 661 ntBASIC17■□□□□ 0.31
SLC25A1P53007 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17■□□□□ 0.31
SLC25A1P53007 Six3os1_6.1-201ENST00000620790 196 ntBASIC17■□□□□ 0.31
SLC25A1P53007 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 AC009113.1-201ENST00000570267 2443 ntBASIC17■□□□□ 0.31
SLC25A1P53007 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SLC25A1P53007 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17■□□□□ 0.31
SLC25A1P53007 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC25A1P53007 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SLC25A1P53007 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms