Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX2P50458 HMGA1P5-201ENST00000412453 271 ntBASIC17.12■□□□□ 0.33
LHX2P50458 TMPOP1-202ENST00000424642 1267 ntBASIC17.12■□□□□ 0.33
LHX2P50458 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.12■□□□□ 0.33
LHX2P50458 AC010203.1-204ENST00000548782 407 ntBASIC17.12■□□□□ 0.33
LHX2P50458 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX2P50458 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX2P50458 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LHX2P50458 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX2P50458 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LHX2P50458 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX2P50458 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX2P50458 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LHX2P50458 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX2P50458 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX2P50458 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LHX2P50458 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX2P50458 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX2P50458 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX2P50458 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.12■□□□□ 0.33
LHX2P50458 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LHX2P50458 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX2P50458 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX2P50458 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LHX2P50458 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX2P50458 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX2P50458 KRT18P57-201ENST00000443599 1254 ntBASIC17.11■□□□□ 0.33
LHX2P50458 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX2P50458 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX2P50458 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX2P50458 TEX21P-204ENST00000641479 1693 ntBASIC17.1■□□□□ 0.33
LHX2P50458 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LHX2P50458 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LHX2P50458 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX2P50458 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX2P50458 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX2P50458 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX2P50458 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX2P50458 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LHX2P50458 LIN28AP1-201ENST00000429574 405 ntBASIC17.1■□□□□ 0.33
LHX2P50458 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX2P50458 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.1■□□□□ 0.33
LHX2P50458 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LHX2P50458 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX2P50458 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX2P50458 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX2P50458 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX2P50458 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX2P50458 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LHX2P50458 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LHX2P50458 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX2P50458 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LHX2P50458 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX2P50458 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX2P50458 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX2P50458 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX2P50458 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX2P50458 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.09■□□□□ 0.33
LHX2P50458 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX2P50458 AP003041.3-201ENST00000527151 707 ntBASIC17.09■□□□□ 0.33
LHX2P50458 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LHX2P50458 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX2P50458 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX2P50458 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LHX2P50458 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX2P50458 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX2P50458 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX2P50458 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX2P50458 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX2P50458 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX2P50458 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.08■□□□□ 0.33
LHX2P50458 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.08■□□□□ 0.33
LHX2P50458 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX2P50458 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX2P50458 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX2P50458 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.08■□□□□ 0.32
LHX2P50458 ATP5G1P1-201ENST00000448724 379 ntBASIC17.08■□□□□ 0.32
LHX2P50458 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms