Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PNMA6B-201ENST00000538162 1200 ntBASIC17.54■□□□□ 0.4
SLC9A3P48764 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC9A3P48764 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC9A3P48764 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SLC9A3P48764 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC9A3P48764 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC9A3P48764 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SLC9A3P48764 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
SLC9A3P48764 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
SLC9A3P48764 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC9A3P48764 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC9A3P48764 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC9A3P48764 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC9A3P48764 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
SLC9A3P48764 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC9A3P48764 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 KRT8P8-201ENST00000434750 1448 ntBASIC17.53■□□□□ 0.4
SLC9A3P48764 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
SLC9A3P48764 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC9A3P48764 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC9A3P48764 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC9A3P48764 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SLC9A3P48764 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC9A3P48764 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC9A3P48764 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC9A3P48764 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.52■□□□□ 0.4
SLC9A3P48764 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC9A3P48764 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC9A3P48764 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC9A3P48764 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC9A3P48764 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC9A3P48764 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC9A3P48764 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC9A3P48764 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SLC9A3P48764 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SLC9A3P48764 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC9A3P48764 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC9A3P48764 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC9A3P48764 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SLC9A3P48764 AC020916.1-201ENST00000587762 1774 ntBASIC17.51■□□□□ 0.39
SLC9A3P48764 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC9A3P48764 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC9A3P48764 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SLC9A3P48764 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SLC9A3P48764 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SLC9A3P48764 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC9A3P48764 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC9A3P48764 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC9A3P48764 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.51■□□□□ 0.39
SLC9A3P48764 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC9A3P48764 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.51■□□□□ 0.39
SLC9A3P48764 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC9A3P48764 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SLC9A3P48764 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SLC9A3P48764 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms