Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP13P45452 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.91■□□□□ 0.78
MMP13P45452 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
MMP13P45452 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.91■□□□□ 0.78
MMP13P45452 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP13P45452 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP13P45452 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP13P45452 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
MMP13P45452 KRT18P16-201ENST00000510337 1294 ntBASIC19.91■□□□□ 0.78
MMP13P45452 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.91■□□□□ 0.78
MMP13P45452 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
MMP13P45452 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
MMP13P45452 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP13P45452 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MMP13P45452 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MMP13P45452 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MMP13P45452 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 PRORSD1P-201ENST00000295112 541 ntBASIC19.9■□□□□ 0.78
MMP13P45452 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.9■□□□□ 0.78
MMP13P45452 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 TUBB8P6-201ENST00000436895 1288 ntBASIC19.9■□□□□ 0.78
MMP13P45452 AC133681.1-201ENST00000465482 601 ntBASIC19.9■□□□□ 0.78
MMP13P45452 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP13P45452 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 AC004264.1-201ENST00000608354 794 ntBASIC19.9■□□□□ 0.78
MMP13P45452 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.9■□□□□ 0.78
MMP13P45452 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP13P45452 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MMP13P45452 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MMP13P45452 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP13P45452 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP13P45452 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP13P45452 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
MMP13P45452 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MMP13P45452 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MMP13P45452 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP13P45452 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP13P45452 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP13P45452 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP13P45452 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP13P45452 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP13P45452 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP13P45452 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP13P45452 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.89■□□□□ 0.77
MMP13P45452 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP13P45452 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
MMP13P45452 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.89■□□□□ 0.77
MMP13P45452 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.89■□□□□ 0.77
MMP13P45452 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MMP13P45452 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.89■□□□□ 0.77
MMP13P45452 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP13P45452 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
MMP13P45452 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MMP13P45452 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP13P45452 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
MMP13P45452 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MMP13P45452 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP13P45452 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MMP13P45452 RPPH1-201ENST00000516869 333 ntBASIC19.88■□□□□ 0.77
MMP13P45452 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP13P45452 AC110285.5-201ENST00000611501 352 ntBASIC19.88■□□□□ 0.77
MMP13P45452 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.88■□□□□ 0.77
MMP13P45452 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP13P45452 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MMP13P45452 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms