Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 HLA-A-209ENST00000638375 975 ntBASIC20.06■□□□□ 0.8
SLC1A1P43005 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SLC1A1P43005 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC1A1P43005 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A1P43005 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC1A1P43005 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A1P43005 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A1P43005 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A1P43005 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC1A1P43005 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A1P43005 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC1A1P43005 HLA-L-209ENST00000420110 1011 ntBASIC20.05■□□□□ 0.8
SLC1A1P43005 KRT17P3-201ENST00000420566 1262 ntBASIC20.05■□□□□ 0.8
SLC1A1P43005 AP003097.1-201ENST00000530657 1135 ntBASIC20.05■□□□□ 0.8
SLC1A1P43005 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC1A1P43005 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC1A1P43005 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A1P43005 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.05■□□□□ 0.8
SLC1A1P43005 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A1P43005 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
SLC1A1P43005 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC1A1P43005 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC1A1P43005 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A1P43005 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC1A1P43005 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A1P43005 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A1P43005 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLC1A1P43005 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC1A1P43005 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A1P43005 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A1P43005 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A1P43005 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SLC1A1P43005 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC1A1P43005 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC1A1P43005 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC1A1P43005 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC1A1P43005 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC1A1P43005 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
SLC1A1P43005 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC1A1P43005 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC1A1P43005 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A1P43005 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SLC1A1P43005 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC1A1P43005 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
SLC1A1P43005 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC1A1P43005 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC1A1P43005 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC1A1P43005 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC1A1P43005 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC1A1P43005 AC069544.1-201ENST00000609399 999 ntBASIC20.03■□□□□ 0.8
SLC1A1P43005 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A1P43005 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC1A1P43005 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC1A1P43005 AL512353.2-201ENST00000448759 1962 ntBASIC20.03■□□□□ 0.8
SLC1A1P43005 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLC1A1P43005 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SLC1A1P43005 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLC1A1P43005 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC1A1P43005 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.02■□□□□ 0.8
SLC1A1P43005 AC026366.1-201ENST00000488803 879 ntBASIC20.02■□□□□ 0.8
SLC1A1P43005 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms