Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A3P43003 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A3P43003 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A3P43003 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A3P43003 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SLC1A3P43003 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A3P43003 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SLC1A3P43003 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SLC1A3P43003 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A3P43003 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SLC1A3P43003 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC1A3P43003 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A3P43003 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
SLC1A3P43003 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A3P43003 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC1A3P43003 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A3P43003 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC1A3P43003 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A3P43003 KRT16P5-201ENST00000455284 522 ntBASIC17.59■□□□□ 0.41
SLC1A3P43003 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 C1QL1P1-201ENST00000568105 661 ntBASIC17.59■□□□□ 0.41
SLC1A3P43003 AC124016.1-201ENST00000609552 612 ntBASIC17.59■□□□□ 0.41
SLC1A3P43003 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A3P43003 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A3P43003 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A3P43003 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A3P43003 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A3P43003 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SLC1A3P43003 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A3P43003 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A3P43003 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A3P43003 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
SLC1A3P43003 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.58■□□□□ 0.41
SLC1A3P43003 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC1A3P43003 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A3P43003 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A3P43003 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC1A3P43003 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A3P43003 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A3P43003 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A3P43003 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A3P43003 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A3P43003 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A3P43003 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A3P43003 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC1A3P43003 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC1A3P43003 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A3P43003 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SLC1A3P43003 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A3P43003 AC110285.5-201ENST00000611501 352 ntBASIC17.58■□□□□ 0.4
SLC1A3P43003 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A3P43003 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A3P43003 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A3P43003 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A3P43003 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A3P43003 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SLC1A3P43003 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC1A3P43003 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A3P43003 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A3P43003 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A3P43003 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A3P43003 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A3P43003 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms