Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CROCCP3-202ENST00000420820 1947 ntBASIC12.9□□□□□ -0.34
CXCL5P42830 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CXCL5P42830 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CXCL5P42830 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.9□□□□□ -0.34
CXCL5P42830 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCL5P42830 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCL5P42830 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCL5P42830 KRT18P61-201ENST00000585825 1298 ntBASIC12.9□□□□□ -0.34
CXCL5P42830 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCL5P42830 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCL5P42830 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 ZNF815P-204ENST00000434898 1737 ntBASIC12.9□□□□□ -0.34
CXCL5P42830 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL5P42830 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCL5P42830 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL5P42830 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CXCL5P42830 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CXCL5P42830 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CXCL5P42830 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.9□□□□□ -0.35
CXCL5P42830 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
CXCL5P42830 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.89□□□□□ -0.35
CXCL5P42830 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 AC016769.1-201ENST00000409132 1010 ntBASIC12.89□□□□□ -0.35
CXCL5P42830 CYP2T1P-201ENST00000432607 1285 ntBASIC12.89□□□□□ -0.35
CXCL5P42830 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC12.89□□□□□ -0.35
CXCL5P42830 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 OR10C1-204ENST00000622521 1039 ntBASIC12.89□□□□□ -0.35
CXCL5P42830 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CXCL5P42830 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC12.89□□□□□ -0.35
CXCL5P42830 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CXCL5P42830 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCL5P42830 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCL5P42830 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CXCL5P42830 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCL5P42830 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CXCL5P42830 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCL5P42830 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.88□□□□□ -0.35
CXCL5P42830 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CXCL5P42830 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCL5P42830 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCL5P42830 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CXCL5P42830 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms