Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.85■□□□□ 0.29
THBS4P35443 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
THBS4P35443 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
THBS4P35443 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
THBS4P35443 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THBS4P35443 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
THBS4P35443 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
THBS4P35443 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 FAM197Y1-201ENST00000421178 764 ntBASIC16.84■□□□□ 0.29
THBS4P35443 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.84■□□□□ 0.29
THBS4P35443 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.84■□□□□ 0.29
THBS4P35443 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
THBS4P35443 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS4P35443 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS4P35443 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
THBS4P35443 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
THBS4P35443 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
THBS4P35443 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 KRT17P2-201ENST00000300992 1314 ntBASIC16.83■□□□□ 0.28
THBS4P35443 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
THBS4P35443 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
THBS4P35443 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.83■□□□□ 0.28
THBS4P35443 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.83■□□□□ 0.28
THBS4P35443 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.83■□□□□ 0.28
THBS4P35443 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
THBS4P35443 C1QL1P1-201ENST00000568105 661 ntBASIC16.83■□□□□ 0.28
THBS4P35443 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.83■□□□□ 0.28
THBS4P35443 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
THBS4P35443 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.83■□□□□ 0.28
THBS4P35443 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 CD177P1-201ENST00000606252 935 ntBASIC16.83■□□□□ 0.28
THBS4P35443 AL353708.3-201ENST00000610272 989 ntBASIC16.83■□□□□ 0.28
THBS4P35443 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS4P35443 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
THBS4P35443 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS4P35443 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS4P35443 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
THBS4P35443 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS4P35443 MIR4785-201ENST00000585005 73 ntBASIC16.82■□□□□ 0.28
THBS4P35443 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
THBS4P35443 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS4P35443 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS4P35443 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
THBS4P35443 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms