Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTPN6P29350 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN6P29350 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN6P29350 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PTPN6P29350 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.18■□□□□ 0.5
PTPN6P29350 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PTPN6P29350 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PTPN6P29350 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 KRT18P16-201ENST00000510337 1294 ntBASIC18.17■□□□□ 0.5
PTPN6P29350 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN6P29350 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN6P29350 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN6P29350 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PTPN6P29350 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PTPN6P29350 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN6P29350 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN6P29350 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 GCSHP5-201ENST00000443090 522 ntBASIC18.16■□□□□ 0.5
PTPN6P29350 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN6P29350 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
PTPN6P29350 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN6P29350 RN7SL471P-201ENST00000580476 299 ntBASIC18.16■□□□□ 0.5
PTPN6P29350 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN6P29350 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PTPN6P29350 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
PTPN6P29350 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN6P29350 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN6P29350 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN6P29350 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PTPN6P29350 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN6P29350 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN6P29350 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN6P29350 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTPN6P29350 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PTPN6P29350 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN6P29350 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PTPN6P29350 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 AL512353.2-201ENST00000448759 1962 ntBASIC18.15■□□□□ 0.5
PTPN6P29350 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN6P29350 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN6P29350 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN6P29350 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms