Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRB3P28472 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.04■□□□□ 0.64
GABRB3P28472 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRB3P28472 AC004264.1-201ENST00000608354 794 ntBASIC19.04■□□□□ 0.64
GABRB3P28472 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GABRB3P28472 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.04■□□□□ 0.64
GABRB3P28472 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
GABRB3P28472 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GABRB3P28472 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRB3P28472 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRB3P28472 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.03■□□□□ 0.64
GABRB3P28472 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.03■□□□□ 0.64
GABRB3P28472 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 AC093525.10-201ENST00000625130 1569 ntBASIC19.03■□□□□ 0.64
GABRB3P28472 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.03■□□□□ 0.64
GABRB3P28472 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.03■□□□□ 0.64
GABRB3P28472 KRASP1-201ENST00000407852 552 ntBASIC19.03■□□□□ 0.64
GABRB3P28472 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.03■□□□□ 0.64
GABRB3P28472 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.03■□□□□ 0.64
GABRB3P28472 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
GABRB3P28472 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.03■□□□□ 0.64
GABRB3P28472 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.03■□□□□ 0.64
GABRB3P28472 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.03■□□□□ 0.64
GABRB3P28472 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
GABRB3P28472 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 KRT8P41-201ENST00000533985 1514 ntBASIC19.03■□□□□ 0.64
GABRB3P28472 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GABRB3P28472 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.03■□□□□ 0.64
GABRB3P28472 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.03■□□□□ 0.64
GABRB3P28472 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.03■□□□□ 0.64
GABRB3P28472 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABRB3P28472 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GABRB3P28472 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.02■□□□□ 0.64
GABRB3P28472 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
GABRB3P28472 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.02■□□□□ 0.64
GABRB3P28472 AC104581.1-202ENST00000635932 2618 ntBASIC19.02■□□□□ 0.64
GABRB3P28472 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 TSPY23P-201ENST00000440136 739 ntBASIC19.02■□□□□ 0.64
GABRB3P28472 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.02■□□□□ 0.64
GABRB3P28472 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.02■□□□□ 0.64
GABRB3P28472 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.02■□□□□ 0.64
GABRB3P28472 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GABRB3P28472 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.02■□□□□ 0.64
GABRB3P28472 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.02■□□□□ 0.64
GABRB3P28472 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
GABRB3P28472 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABRB3P28472 AL512353.2-201ENST00000448759 1962 ntBASIC19.02■□□□□ 0.64
GABRB3P28472 AC120498.9-201ENST00000339021 3867 ntBASIC19.02■□□□□ 0.64
GABRB3P28472 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
GABRB3P28472 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
GABRB3P28472 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.02■□□□□ 0.63
GABRB3P28472 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.02■□□□□ 0.63
GABRB3P28472 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GABRB3P28472 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GABRB3P28472 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
GABRB3P28472 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.02■□□□□ 0.63
GABRB3P28472 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GABRB3P28472 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABRB3P28472 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
GABRB3P28472 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GABRB3P28472 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABRB3P28472 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
GABRB3P28472 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABRB3P28472 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABRB3P28472 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GABRB3P28472 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABRB3P28472 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GABRB3P28472 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.01■□□□□ 0.63
GABRB3P28472 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.01■□□□□ 0.63
GABRB3P28472 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
GABRB3P28472 RN7SL471P-201ENST00000580476 299 ntBASIC19.01■□□□□ 0.63
GABRB3P28472 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.01■□□□□ 0.63
GABRB3P28472 AC124016.1-201ENST00000609552 612 ntBASIC19.01■□□□□ 0.63
GABRB3P28472 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.01■□□□□ 0.63
GABRB3P28472 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms