Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN3P26045 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.54■□□□□ 0.72
PTPN3P26045 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 FEM1AP3-201ENST00000403722 1741 ntBASIC19.54■□□□□ 0.72
PTPN3P26045 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN3P26045 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPN3P26045 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PTPN3P26045 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
PTPN3P26045 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN3P26045 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 AC004980.1-204ENST00000429707 299 ntBASIC19.53■□□□□ 0.72
PTPN3P26045 TSPY21P-201ENST00000433481 731 ntBASIC19.53■□□□□ 0.72
PTPN3P26045 TSPY23P-201ENST00000440136 739 ntBASIC19.53■□□□□ 0.72
PTPN3P26045 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPN3P26045 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.53■□□□□ 0.72
PTPN3P26045 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN3P26045 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.53■□□□□ 0.72
PTPN3P26045 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN3P26045 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PTPN3P26045 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN3P26045 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN3P26045 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN3P26045 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN3P26045 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 AC004408.2-201ENST00000623613 2777 ntBASIC19.52■□□□□ 0.72
PTPN3P26045 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
PTPN3P26045 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
PTPN3P26045 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 ABHD17AP1-201ENST00000358206 933 ntBASIC19.52■□□□□ 0.72
PTPN3P26045 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 AL353807.1-201ENST00000427475 662 ntBASIC19.52■□□□□ 0.72
PTPN3P26045 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN3P26045 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.52■□□□□ 0.72
PTPN3P26045 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 RARRES2P10-201ENST00000564312 460 ntBASIC19.52■□□□□ 0.72
PTPN3P26045 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN3P26045 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.52■□□□□ 0.72
PTPN3P26045 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PTPN3P26045 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN3P26045 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN3P26045 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN3P26045 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN3P26045 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
PTPN3P26045 AC006333.2-201ENST00000607957 2099 ntBASIC19.52■□□□□ 0.71
PTPN3P26045 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
PTPN3P26045 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 KSR1P1-201ENST00000446298 240 ntBASIC19.51■□□□□ 0.71
PTPN3P26045 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.51■□□□□ 0.71
PTPN3P26045 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 AC142381.4-202ENST00000563973 229 ntBASIC19.51■□□□□ 0.71
PTPN3P26045 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPN3P26045 AF186192.3-201ENST00000583427 947 ntBASIC19.51■□□□□ 0.71
PTPN3P26045 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPN3P26045 AC131212.4-201ENST00000623606 975 ntBASIC19.51■□□□□ 0.71
PTPN3P26045 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.51■□□□□ 0.71
PTPN3P26045 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPN3P26045 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PTPN3P26045 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms