Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VCLP18206 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.25■□□□□ 0.67
VCLP18206 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.25■□□□□ 0.67
VCLP18206 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
VCLP18206 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VCLP18206 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
VCLP18206 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.24■□□□□ 0.67
VCLP18206 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.24■□□□□ 0.67
VCLP18206 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VCLP18206 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VCLP18206 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
VCLP18206 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.24■□□□□ 0.67
VCLP18206 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.24■□□□□ 0.67
VCLP18206 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.24■□□□□ 0.67
VCLP18206 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
VCLP18206 AC233702.5-201ENST00000584107 538 ntBASIC19.24■□□□□ 0.67
VCLP18206 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VCLP18206 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.24■□□□□ 0.67
VCLP18206 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VCLP18206 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCLP18206 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.23■□□□□ 0.67
VCLP18206 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.23■□□□□ 0.67
VCLP18206 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.23■□□□□ 0.67
VCLP18206 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.23■□□□□ 0.67
VCLP18206 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.23■□□□□ 0.67
VCLP18206 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.23■□□□□ 0.67
VCLP18206 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.23■□□□□ 0.67
VCLP18206 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.23■□□□□ 0.67
VCLP18206 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.23■□□□□ 0.67
VCLP18206 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCLP18206 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.22■□□□□ 0.67
VCLP18206 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
VCLP18206 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.22■□□□□ 0.67
VCLP18206 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VCLP18206 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCLP18206 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.22■□□□□ 0.67
VCLP18206 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.22■□□□□ 0.67
VCLP18206 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VCLP18206 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCLP18206 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCLP18206 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.22■□□□□ 0.67
VCLP18206 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.22■□□□□ 0.67
VCLP18206 AF186192.3-201ENST00000583427 947 ntBASIC19.22■□□□□ 0.67
VCLP18206 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.22■□□□□ 0.67
VCLP18206 Z99916.2-201ENST00000604037 246 ntBASIC19.22■□□□□ 0.67
VCLP18206 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.22■□□□□ 0.67
VCLP18206 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.22■□□□□ 0.67
VCLP18206 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VCLP18206 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
VCLP18206 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCLP18206 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VCLP18206 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.22■□□□□ 0.67
VCLP18206 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.22■□□□□ 0.67
VCLP18206 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
VCLP18206 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms