Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.5■■□□□ 1.35
COL11A2P13942 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
COL11A2P13942 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.5■■□□□ 1.35
COL11A2P13942 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.49■■□□□ 1.35
COL11A2P13942 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL11A2P13942 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL11A2P13942 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL11A2P13942 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL11A2P13942 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.49■■□□□ 1.35
COL11A2P13942 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL11A2P13942 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
COL11A2P13942 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.49■■□□□ 1.35
COL11A2P13942 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.49■■□□□ 1.35
COL11A2P13942 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
COL11A2P13942 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.49■■□□□ 1.35
COL11A2P13942 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
COL11A2P13942 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL11A2P13942 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL11A2P13942 AL391807.1-203ENST00000604392 2365 ntBASIC23.49■■□□□ 1.35
COL11A2P13942 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.49■■□□□ 1.35
COL11A2P13942 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL11A2P13942 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL11A2P13942 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL11A2P13942 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL11A2P13942 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.48■■□□□ 1.35
COL11A2P13942 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
COL11A2P13942 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL11A2P13942 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL11A2P13942 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL11A2P13942 MRPL3P1-201ENST00000400109 1033 ntBASIC23.47■■□□□ 1.35
COL11A2P13942 LINC00265-3P-201ENST00000447588 903 ntBASIC23.47■■□□□ 1.35
COL11A2P13942 AP002469.2-201ENST00000531724 424 ntBASIC23.47■■□□□ 1.35
COL11A2P13942 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.47■■□□□ 1.35
COL11A2P13942 AC120114.3-201ENST00000611923 658 ntBASIC23.47■■□□□ 1.35
COL11A2P13942 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 LINC00565-201ENST00000562710 2331 ntBASIC23.47■■□□□ 1.35
COL11A2P13942 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.47■■□□□ 1.35
COL11A2P13942 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.47■■□□□ 1.35
COL11A2P13942 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.47■■□□□ 1.35
COL11A2P13942 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.47■■□□□ 1.35
COL11A2P13942 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
COL11A2P13942 TSPY22P-201ENST00000427496 604 ntBASIC23.47■■□□□ 1.35
COL11A2P13942 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.47■■□□□ 1.35
COL11A2P13942 AC106795.1-205ENST00000512851 1056 ntBASIC23.47■■□□□ 1.35
COL11A2P13942 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.47■■□□□ 1.35
COL11A2P13942 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL11A2P13942 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.47■■□□□ 1.35
COL11A2P13942 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.47■■□□□ 1.35
COL11A2P13942 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.47■■□□□ 1.35
COL11A2P13942 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL11A2P13942 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL11A2P13942 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
COL11A2P13942 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.46■■□□□ 1.35
COL11A2P13942 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL11A2P13942 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.46■■□□□ 1.35
COL11A2P13942 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL11A2P13942 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.46■■□□□ 1.35
COL11A2P13942 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL11A2P13942 AL023284.2-201ENST00000405850 579 ntBASIC23.46■■□□□ 1.35
COL11A2P13942 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.46■■□□□ 1.35
COL11A2P13942 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.46■■□□□ 1.35
COL11A2P13942 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL11A2P13942 AC138894.3-201ENST00000603787 634 ntBASIC23.46■■□□□ 1.35
COL11A2P13942 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL11A2P13942 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
COL11A2P13942 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.45■■□□□ 1.35
COL11A2P13942 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
COL11A2P13942 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL11A2P13942 MIR3917-201ENST00000580971 93 ntBASIC23.45■■□□□ 1.34
COL11A2P13942 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL11A2P13942 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL11A2P13942 LINC00167-201ENST00000530583 1419 ntBASIC23.45■■□□□ 1.34
COL11A2P13942 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL11A2P13942 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.45■■□□□ 1.34
COL11A2P13942 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
COL11A2P13942 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL11A2P13942 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL11A2P13942 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL11A2P13942 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL11A2P13942 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.45■■□□□ 1.34
COL11A2P13942 AL160237.2-201ENST00000556165 472 ntBASIC23.45■■□□□ 1.34
COL11A2P13942 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL11A2P13942 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL11A2P13942 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL11A2P13942 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL11A2P13942 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL11A2P13942 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL11A2P13942 AKR1C7P-201ENST00000305623 895 ntBASIC23.44■■□□□ 1.34
COL11A2P13942 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.44■■□□□ 1.34
COL11A2P13942 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.44■■□□□ 1.34
COL11A2P13942 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms