Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.19■□□□□ 0.82
LCP1P13796 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.19■□□□□ 0.82
LCP1P13796 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.19■□□□□ 0.82
LCP1P13796 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCP1P13796 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.19■□□□□ 0.82
LCP1P13796 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LCP1P13796 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.19■□□□□ 0.82
LCP1P13796 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LCP1P13796 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCP1P13796 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCP1P13796 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCP1P13796 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LCP1P13796 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.18■□□□□ 0.82
LCP1P13796 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.18■□□□□ 0.82
LCP1P13796 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.18■□□□□ 0.82
LCP1P13796 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.18■□□□□ 0.82
LCP1P13796 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.18■□□□□ 0.82
LCP1P13796 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.18■□□□□ 0.82
LCP1P13796 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LCP1P13796 RBM17P1-201ENST00000453646 1190 ntBASIC20.18■□□□□ 0.82
LCP1P13796 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.18■□□□□ 0.82
LCP1P13796 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
LCP1P13796 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.18■□□□□ 0.82
LCP1P13796 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.18■□□□□ 0.82
LCP1P13796 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.18■□□□□ 0.82
LCP1P13796 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.18■□□□□ 0.82
LCP1P13796 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.18■□□□□ 0.82
LCP1P13796 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCP1P13796 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.17■□□□□ 0.82
LCP1P13796 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.17■□□□□ 0.82
LCP1P13796 UNC93B2-201ENST00000285383 730 ntBASIC20.17■□□□□ 0.82
LCP1P13796 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.17■□□□□ 0.82
LCP1P13796 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.17■□□□□ 0.82
LCP1P13796 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.17■□□□□ 0.82
LCP1P13796 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.17■□□□□ 0.82
LCP1P13796 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.17■□□□□ 0.82
LCP1P13796 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.17■□□□□ 0.82
LCP1P13796 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
LCP1P13796 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
LCP1P13796 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCP1P13796 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LCP1P13796 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.16■□□□□ 0.82
LCP1P13796 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LCP1P13796 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.16■□□□□ 0.82
LCP1P13796 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 SLC25A1P4-201ENST00000567977 778 ntBASIC20.16■□□□□ 0.82
LCP1P13796 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.16■□□□□ 0.82
LCP1P13796 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.16■□□□□ 0.82
LCP1P13796 AP000525.1-201ENST00000608286 694 ntBASIC20.16■□□□□ 0.82
LCP1P13796 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 AC079598.2-202ENST00000546624 1451 ntBASIC20.16■□□□□ 0.82
LCP1P13796 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCP1P13796 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCP1P13796 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCP1P13796 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
LCP1P13796 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.15■□□□□ 0.82
LCP1P13796 TSPY23P-201ENST00000440136 739 ntBASIC20.15■□□□□ 0.82
LCP1P13796 AC097488.1-201ENST00000507834 756 ntBASIC20.15■□□□□ 0.82
LCP1P13796 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.15■□□□□ 0.82
LCP1P13796 AP000692.2-201ENST00000608391 879 ntBASIC20.15■□□□□ 0.82
LCP1P13796 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.15■□□□□ 0.82
LCP1P13796 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCP1P13796 KRT8P11-201ENST00000409686 1436 ntBASIC20.15■□□□□ 0.82
LCP1P13796 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.15■□□□□ 0.82
LCP1P13796 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCP1P13796 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LCP1P13796 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.15■□□□□ 0.82
LCP1P13796 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.15■□□□□ 0.82
LCP1P13796 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCP1P13796 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCP1P13796 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LCP1P13796 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCP1P13796 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms