Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AL049812.1-201ENST00000432563 2267 ntBASIC20.17■□□□□ 0.82
KRT3P12035 NIFKP9-201ENST00000419265 221 ntBASIC20.17■□□□□ 0.82
KRT3P12035 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.17■□□□□ 0.82
KRT3P12035 AP002982.1-201ENST00000492365 877 ntBASIC20.17■□□□□ 0.82
KRT3P12035 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
KRT3P12035 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.17■□□□□ 0.82
KRT3P12035 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT3P12035 AL353708.3-201ENST00000610272 989 ntBASIC20.17■□□□□ 0.82
KRT3P12035 AL445675.2-201ENST00000620291 557 ntBASIC20.17■□□□□ 0.82
KRT3P12035 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT3P12035 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
KRT3P12035 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT3P12035 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT3P12035 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT3P12035 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT3P12035 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT3P12035 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT3P12035 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT3P12035 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT3P12035 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT3P12035 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT3P12035 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT3P12035 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT3P12035 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT3P12035 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 AC142381.4-202ENST00000563973 229 ntBASIC20.16■□□□□ 0.82
KRT3P12035 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT3P12035 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT3P12035 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KRT3P12035 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT3P12035 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT3P12035 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT3P12035 IRX1P1-201ENST00000438849 1838 ntBASIC20.16■□□□□ 0.82
KRT3P12035 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KRT3P12035 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT3P12035 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KRT3P12035 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
KRT3P12035 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
KRT3P12035 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 AL353807.1-201ENST00000427475 662 ntBASIC20.15■□□□□ 0.82
KRT3P12035 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT3P12035 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT3P12035 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.15■□□□□ 0.82
KRT3P12035 RARRES2P10-201ENST00000564312 460 ntBASIC20.15■□□□□ 0.82
KRT3P12035 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT3P12035 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT3P12035 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
KRT3P12035 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT3P12035 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
KRT3P12035 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
KRT3P12035 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KRT3P12035 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
KRT3P12035 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT3P12035 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT3P12035 FP475955.4-201ENST00000623131 1990 ntBASIC20.14■□□□□ 0.81
KRT3P12035 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT3P12035 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
KRT3P12035 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT3P12035 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
KRT3P12035 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT3P12035 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT3P12035 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT3P12035 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KRT3P12035 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT3P12035 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT3P12035 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT3P12035 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT3P12035 ABHD17AP1-201ENST00000358206 933 ntBASIC20.14■□□□□ 0.81
KRT3P12035 KSR1P1-201ENST00000446298 240 ntBASIC20.14■□□□□ 0.81
KRT3P12035 AC098590.1-201ENST00000468126 897 ntBASIC20.14■□□□□ 0.81
KRT3P12035 RPS2P4-201ENST00000476944 856 ntBASIC20.14■□□□□ 0.81
KRT3P12035 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.14■□□□□ 0.81
KRT3P12035 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.14■□□□□ 0.81
KRT3P12035 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.14■□□□□ 0.81
KRT3P12035 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT3P12035 AC131212.4-201ENST00000623606 975 ntBASIC20.14■□□□□ 0.81
KRT3P12035 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms