Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCNAP12004 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCNAP12004 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCNAP12004 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCNAP12004 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCNAP12004 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
PCNAP12004 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PCNAP12004 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCNAP12004 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCNAP12004 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNAP12004 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCNAP12004 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.64■□□□□ 0.57
PCNAP12004 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.64■□□□□ 0.57
PCNAP12004 AC006058.3-201ENST00000606217 1069 ntBASIC18.64■□□□□ 0.57
PCNAP12004 AL023875.1-201ENST00000640777 796 ntBASIC18.64■□□□□ 0.57
PCNAP12004 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNAP12004 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNAP12004 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCNAP12004 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNAP12004 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNAP12004 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNAP12004 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PCNAP12004 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCNAP12004 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCNAP12004 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.64■□□□□ 0.57
PCNAP12004 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCNAP12004 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCNAP12004 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
PCNAP12004 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
PCNAP12004 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCNAP12004 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.63■□□□□ 0.57
PCNAP12004 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.63■□□□□ 0.57
PCNAP12004 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.63■□□□□ 0.57
PCNAP12004 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 AC239809.2-201ENST00000415381 517 ntBASIC18.63■□□□□ 0.57
PCNAP12004 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCNAP12004 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.63■□□□□ 0.57
PCNAP12004 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.63■□□□□ 0.57
PCNAP12004 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.63■□□□□ 0.57
PCNAP12004 MIR4651-201ENST00000582622 73 ntBASIC18.63■□□□□ 0.57
PCNAP12004 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
PCNAP12004 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCNAP12004 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCNAP12004 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCNAP12004 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCNAP12004 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.62■□□□□ 0.57
PCNAP12004 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 KRASP1-201ENST00000407852 552 ntBASIC18.62■□□□□ 0.57
PCNAP12004 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.62■□□□□ 0.57
PCNAP12004 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.62■□□□□ 0.57
PCNAP12004 AC004264.1-201ENST00000608354 794 ntBASIC18.62■□□□□ 0.57
PCNAP12004 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.62■□□□□ 0.57
PCNAP12004 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCNAP12004 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCNAP12004 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCNAP12004 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCNAP12004 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.62■□□□□ 0.57
PCNAP12004 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCNAP12004 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCNAP12004 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCNAP12004 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCNAP12004 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.61■□□□□ 0.57
PCNAP12004 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
PCNAP12004 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCNAP12004 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
PCNAP12004 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms