Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.83■□□□□ 0.61
CAPN1P07384 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN1P07384 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.83■□□□□ 0.61
CAPN1P07384 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CAPN1P07384 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.83■□□□□ 0.6
CAPN1P07384 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.83■□□□□ 0.6
CAPN1P07384 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.83■□□□□ 0.6
CAPN1P07384 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.83■□□□□ 0.6
CAPN1P07384 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CAPN1P07384 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CAPN1P07384 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CAPN1P07384 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.83■□□□□ 0.6
CAPN1P07384 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN1P07384 AL135905.2-201ENST00000584934 1404 ntBASIC18.83■□□□□ 0.6
CAPN1P07384 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CAPN1P07384 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.82■□□□□ 0.6
CAPN1P07384 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.82■□□□□ 0.6
CAPN1P07384 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.82■□□□□ 0.6
CAPN1P07384 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CAPN1P07384 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.82■□□□□ 0.6
CAPN1P07384 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.82■□□□□ 0.6
CAPN1P07384 AC113410.3-201ENST00000623366 203 ntBASIC18.82■□□□□ 0.6
CAPN1P07384 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.82■□□□□ 0.6
CAPN1P07384 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.82■□□□□ 0.6
CAPN1P07384 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.82■□□□□ 0.6
CAPN1P07384 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN1P07384 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN1P07384 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CAPN1P07384 ZNF815P-204ENST00000434898 1737 ntBASIC18.81■□□□□ 0.6
CAPN1P07384 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.81■□□□□ 0.6
CAPN1P07384 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN1P07384 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.81■□□□□ 0.6
CAPN1P07384 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN1P07384 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.81■□□□□ 0.6
CAPN1P07384 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.81■□□□□ 0.6
CAPN1P07384 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN1P07384 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.81■□□□□ 0.6
CAPN1P07384 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.8■□□□□ 0.6
CAPN1P07384 AP001412.1-201ENST00000608405 714 ntBASIC18.8■□□□□ 0.6
CAPN1P07384 AC073912.3-201ENST00000624414 853 ntBASIC18.8■□□□□ 0.6
CAPN1P07384 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPN1P07384 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms