Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 TSPY14P-201ENST00000303979 915 ntBASIC19.05■□□□□ 0.64
CAPNS1P04632 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CAPNS1P04632 KSR1P1-201ENST00000446298 240 ntBASIC19.05■□□□□ 0.64
CAPNS1P04632 ATP5G1P1-201ENST00000448724 379 ntBASIC19.05■□□□□ 0.64
CAPNS1P04632 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CAPNS1P04632 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPNS1P04632 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPNS1P04632 LINC01238-205ENST00000567549 1107 ntBASIC19.05■□□□□ 0.64
CAPNS1P04632 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPNS1P04632 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.05■□□□□ 0.64
CAPNS1P04632 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPNS1P04632 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CAPNS1P04632 AL138781.2-201ENST00000617896 1843 ntBASIC19.04■□□□□ 0.64
CAPNS1P04632 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPNS1P04632 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CAPNS1P04632 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.04■□□□□ 0.64
CAPNS1P04632 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.04■□□□□ 0.64
CAPNS1P04632 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.04■□□□□ 0.64
CAPNS1P04632 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CAPNS1P04632 ECEL1P2-202ENST00000465689 757 ntBASIC19.04■□□□□ 0.64
CAPNS1P04632 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.04■□□□□ 0.64
CAPNS1P04632 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPNS1P04632 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.04■□□□□ 0.64
CAPNS1P04632 EGLN1P1-201ENST00000531623 762 ntBASIC19.04■□□□□ 0.64
CAPNS1P04632 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CAPNS1P04632 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPNS1P04632 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPNS1P04632 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPNS1P04632 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CAPNS1P04632 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CAPNS1P04632 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPNS1P04632 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPNS1P04632 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.03■□□□□ 0.64
CAPNS1P04632 AC117947.1-201ENST00000427448 529 ntBASIC19.03■□□□□ 0.64
CAPNS1P04632 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPNS1P04632 CR392000.1-201ENST00000624770 1228 ntBASIC19.03■□□□□ 0.64
CAPNS1P04632 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CAPNS1P04632 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPNS1P04632 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPNS1P04632 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CAPNS1P04632 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
CAPNS1P04632 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPNS1P04632 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CAPNS1P04632 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 NIFKP9-201ENST00000419265 221 ntBASIC19.02■□□□□ 0.64
CAPNS1P04632 PGM5P4-201ENST00000421970 445 ntBASIC19.02■□□□□ 0.64
CAPNS1P04632 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
CAPNS1P04632 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CAPNS1P04632 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.02■□□□□ 0.64
CAPNS1P04632 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CAPNS1P04632 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.02■□□□□ 0.64
CAPNS1P04632 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.02■□□□□ 0.64
CAPNS1P04632 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms