Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 AL031598.1-201ENST00000561511 1773 ntBASIC17.22■□□□□ 0.35
HLA-DPB1P04440 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 ID1-201ENST00000376105 1233 ntBASIC17.21■□□□□ 0.35
HLA-DPB1P04440 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 AL355802.2-201ENST00000402069 882 ntBASIC17.21■□□□□ 0.35
HLA-DPB1P04440 DUSP5P2-201ENST00000426873 1033 ntBASIC17.21■□□□□ 0.35
HLA-DPB1P04440 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 AC098934.4-201ENST00000564127 592 ntBASIC17.21■□□□□ 0.35
HLA-DPB1P04440 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPB1P04440 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DPB1P04440 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DPB1P04440 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.21■□□□□ 0.34
HLA-DPB1P04440 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.21■□□□□ 0.34
HLA-DPB1P04440 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.21■□□□□ 0.34
HLA-DPB1P04440 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 AC093525.10-201ENST00000625130 1569 ntBASIC17.2■□□□□ 0.34
HLA-DPB1P04440 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 C2orf69P4-201ENST00000565394 541 ntBASIC17.2■□□□□ 0.34
HLA-DPB1P04440 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 MIR4758-201ENST00000577688 71 ntBASIC17.2■□□□□ 0.34
HLA-DPB1P04440 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 AC092118.2-201ENST00000613495 667 ntBASIC17.2■□□□□ 0.34
HLA-DPB1P04440 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 TEX21P-204ENST00000641479 1693 ntBASIC17.2■□□□□ 0.34
HLA-DPB1P04440 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPB1P04440 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 HTR7P1-202ENST00000624664 4411 ntBASIC17.19■□□□□ 0.34
HLA-DPB1P04440 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.19■□□□□ 0.34
HLA-DPB1P04440 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DPB1P04440 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms