Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
P04436 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.51■□□□□ 0.39
P04436 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
P04436 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
P04436 KRT8P11-201ENST00000409686 1436 ntBASIC17.51■□□□□ 0.39
P04436 LIN28AP1-201ENST00000429574 405 ntBASIC17.51■□□□□ 0.39
P04436 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.51■□□□□ 0.39
P04436 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
P04436 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.51■□□□□ 0.39
P04436 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.51■□□□□ 0.39
P04436 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.51■□□□□ 0.39
P04436 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
P04436 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
P04436 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.51■□□□□ 0.39
P04436 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04436 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.51■□□□□ 0.39
P04436 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
P04436 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.5■□□□□ 0.39
P04436 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.5■□□□□ 0.39
P04436 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.5■□□□□ 0.39
P04436 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 AC113347.1-201ENST00000413321 391 ntBASIC17.5■□□□□ 0.39
P04436 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.5■□□□□ 0.39
P04436 AL137013.1-201ENST00000432946 1228 ntBASIC17.5■□□□□ 0.39
P04436 TSPY21P-201ENST00000433481 731 ntBASIC17.5■□□□□ 0.39
P04436 SLC25A3P1-201ENST00000443844 931 ntBASIC17.5■□□□□ 0.39
P04436 ECEL1P2-202ENST00000465689 757 ntBASIC17.5■□□□□ 0.39
P04436 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.5■□□□□ 0.39
P04436 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
P04436 TREX1-205ENST00000625293 1783 ntBASIC17.5■□□□□ 0.39
P04436 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
P04436 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 SDHAP1-207ENST00000440850 2000 ntBASIC17.5■□□□□ 0.39
P04436 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.5■□□□□ 0.39
P04436 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04436 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
P04436 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.49■□□□□ 0.39
P04436 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.49■□□□□ 0.39
P04436 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.49■□□□□ 0.39
P04436 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.49■□□□□ 0.39
P04436 ATP5G1P1-201ENST00000448724 379 ntBASIC17.49■□□□□ 0.39
P04436 TSPY17P-201ENST00000450329 467 ntBASIC17.49■□□□□ 0.39
P04436 CA15P1-201ENST00000481698 905 ntBASIC17.49■□□□□ 0.39
P04436 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.49■□□□□ 0.39
P04436 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.49■□□□□ 0.39
P04436 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
P04436 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.49■□□□□ 0.39
P04436 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04436 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.48■□□□□ 0.39
P04436 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.48■□□□□ 0.39
P04436 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.48■□□□□ 0.39
P04436 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.48■□□□□ 0.39
P04436 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.48■□□□□ 0.39
P04436 AC005521.1-201ENST00000393351 872 ntBASIC17.48■□□□□ 0.39
P04436 RCN1P1-201ENST00000400413 996 ntBASIC17.48■□□□□ 0.39
P04436 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.48■□□□□ 0.39
P04436 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
P04436 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
P04436 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms