Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AC104417.2-201ENST00000562989 1793 ntBASIC20.54■□□□□ 0.88
TUBB4AP04350 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TUBB4AP04350 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TUBB4AP04350 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TUBB4AP04350 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.53■□□□□ 0.88
TUBB4AP04350 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 AL136967.2-201ENST00000623968 743 ntBASIC20.53■□□□□ 0.88
TUBB4AP04350 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBB4AP04350 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBB4AP04350 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 LINC00896-202ENST00000609602 2128 ntBASIC20.53■□□□□ 0.88
TUBB4AP04350 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBB4AP04350 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.52■□□□□ 0.88
TUBB4AP04350 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TUBB4AP04350 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBB4AP04350 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
TUBB4AP04350 MCRIP2P1-201ENST00000394346 511 ntBASIC20.52■□□□□ 0.88
TUBB4AP04350 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.52■□□□□ 0.88
TUBB4AP04350 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.52■□□□□ 0.88
TUBB4AP04350 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBB4AP04350 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
TUBB4AP04350 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.52■□□□□ 0.88
TUBB4AP04350 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBB4AP04350 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TUBB4AP04350 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.52■□□□□ 0.87
TUBB4AP04350 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TUBB4AP04350 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TUBB4AP04350 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TUBB4AP04350 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TUBB4AP04350 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TUBB4AP04350 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 FZD10-202ENST00000539839 3282 ntBASIC20.51■□□□□ 0.87
TUBB4AP04350 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.51■□□□□ 0.87
TUBB4AP04350 AC105020.6-201ENST00000621523 1217 ntBASIC20.51■□□□□ 0.87
TUBB4AP04350 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.51■□□□□ 0.87
TUBB4AP04350 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 AC139713.2-201ENST00000641328 2723 ntBASIC20.51■□□□□ 0.87
TUBB4AP04350 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TUBB4AP04350 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TUBB4AP04350 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
TUBB4AP04350 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TUBB4AP04350 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB4AP04350 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBB4AP04350 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
TUBB4AP04350 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBB4AP04350 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 SDHAP1-207ENST00000440850 2000 ntBASIC20.5■□□□□ 0.87
TUBB4AP04350 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB4AP04350 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms