Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
APOA1P02647 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.06■□□□□ 0.32
APOA1P02647 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 MIR572-201ENST00000384983 95 ntBASIC17.06■□□□□ 0.32
APOA1P02647 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.06■□□□□ 0.32
APOA1P02647 AL358852.1-201ENST00000623174 1268 ntBASIC17.06■□□□□ 0.32
APOA1P02647 AL031598.1-201ENST00000561511 1773 ntBASIC17.06■□□□□ 0.32
APOA1P02647 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
APOA1P02647 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.06■□□□□ 0.32
APOA1P02647 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
APOA1P02647 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOA1P02647 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.05■□□□□ 0.32
APOA1P02647 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
APOA1P02647 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.05■□□□□ 0.32
APOA1P02647 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
APOA1P02647 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
APOA1P02647 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
APOA1P02647 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.05■□□□□ 0.32
APOA1P02647 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.05■□□□□ 0.32
APOA1P02647 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.05■□□□□ 0.32
APOA1P02647 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.05■□□□□ 0.32
APOA1P02647 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOA1P02647 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.04■□□□□ 0.32
APOA1P02647 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.04■□□□□ 0.32
APOA1P02647 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.04■□□□□ 0.32
APOA1P02647 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.04■□□□□ 0.32
APOA1P02647 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 SIRPAP1-201ENST00000448467 1770 ntBASIC17.04■□□□□ 0.32
APOA1P02647 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APOA1P02647 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOA1P02647 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA1P02647 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.03■□□□□ 0.32
APOA1P02647 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APOA1P02647 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA1P02647 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA1P02647 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA1P02647 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
APOA1P02647 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
APOA1P02647 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA1P02647 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.03■□□□□ 0.32
APOA1P02647 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA1P02647 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA1P02647 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA1P02647 AC091799.1-201ENST00000422823 811 ntBASIC17.03■□□□□ 0.32
APOA1P02647 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.03■□□□□ 0.32
APOA1P02647 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.03■□□□□ 0.32
APOA1P02647 AC010141.2-201ENST00000452426 721 ntBASIC17.03■□□□□ 0.32
APOA1P02647 TPRG1LP1-201ENST00000598702 760 ntBASIC17.03■□□□□ 0.32
APOA1P02647 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA1P02647 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA1P02647 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA1P02647 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
APOA1P02647 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms