Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6AP02538 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT6AP02538 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6AP02538 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6AP02538 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KRT6AP02538 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6AP02538 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6AP02538 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT6AP02538 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
KRT6AP02538 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
KRT6AP02538 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
KRT6AP02538 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
KRT6AP02538 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.55■□□□□ 0.56
KRT6AP02538 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
KRT6AP02538 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT6AP02538 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
KRT6AP02538 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
KRT6AP02538 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.54■□□□□ 0.56
KRT6AP02538 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
KRT6AP02538 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT6AP02538 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
KRT6AP02538 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
KRT6AP02538 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
KRT6AP02538 NBPF21P-201ENST00000425093 1451 ntBASIC18.54■□□□□ 0.56
KRT6AP02538 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
KRT6AP02538 FP475955.4-201ENST00000623131 1990 ntBASIC18.54■□□□□ 0.56
KRT6AP02538 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT6AP02538 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.54■□□□□ 0.56
KRT6AP02538 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.54■□□□□ 0.56
KRT6AP02538 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
KRT6AP02538 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
KRT6AP02538 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT6AP02538 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
KRT6AP02538 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT6AP02538 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.54■□□□□ 0.56
KRT6AP02538 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
KRT6AP02538 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT6AP02538 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
KRT6AP02538 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT6AP02538 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT6AP02538 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT6AP02538 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT6AP02538 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT6AP02538 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 AC004264.1-201ENST00000608354 794 ntBASIC18.53■□□□□ 0.56
KRT6AP02538 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
KRT6AP02538 AC090340.1-201ENST00000620778 4980 ntBASIC18.53■□□□□ 0.56
KRT6AP02538 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms